Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017-
04-24] 296 sequences; 15,098,268 total letters
Query= NC_003038.1
Length=212482
Score E
Sequences producing significant alignments: (Bits) Value
seq276 89.7 7e-13
seq245 89.7 7e-13
>seq276
Length=61907
Score = 89.7 bits (98), Expect = 7e-13
Identities = 144/203 (71%), Gaps = 8/203 (4%)
Strand=Plus/Minus
Query 104403 TGATTTAGGACCTATTTATGGTTTTCAGTGGAGACATTATGGTGAAAATTATATTGGGTG 104462
||||||||| || |||||||||| || |||||||||| ||||| | ||| | | ||
Sbjct 8844 TGATTTAGGTCCGGTTTATGGTTTCCAATGGAGACATTTTGGTGCTGAATATGTGGATTG 8785
Query 104463 CGATAATAAATATGGTGGT-----ATA-GATCAACTCAAAAATATTATTACAACAATTCA 104516
||| | | ||| ||| ||| |||||| | || || |||| | | |||| |
Sbjct 8784 TGATGCTGATTATACCGGTCAAGGATATGATCAATTACAAGATGTTATAAAGA-AATTAA 8726
Query 104517 AAATGAA-CCTTGGGATAGAAGAATGATATTATTAGCTTGGAACCCAAAGGATAATTCTA 104575
| | ||| || | ||||||||||| || | | |||||||||||| ||| | |||
Sbjct 8725 AGACGAATCCATATGATAGAAGAATTATCATGTCTGCTTGGAACCCACCTGATTTTGCTA 8666
Query 104576 AAATGGCACTTCCTCCTTGTCAT 104598
|||||||||| || || ||||||
Sbjct 8665 AAATGGCACTCCCACCATGTCAT 8643
>seq245
Length=85806
Score = 89.7 bits (98), Expect = 7e-13
Identities = 122/170 (72%), Gaps = 3/170 (2%)
Strand=Plus/Plus
Query 73950 AATAGACAACCTACTTTACATAAAGCATCAATGATGGCTCTTCGAGTTAAAATTATG--- 74006
||| | |||||||||||||||||||| || ||||||| || | ||| | | || ||
Sbjct 3280 AATCGTCAACCTACTTTACATAAAGCTTCTATGATGGGTCATAAAGTCAGAGTTTTGCCT 3339
Query 74007 GATGTAAAAACCTTTAAATTTAATCTTGCATGCACTAAACCATATAATGCAGATTTTGAT 74066
| || |||||| || | ||| || |||| ||| | |||||||| ||||| |||
Sbjct 3340 GGTGAAAAAACATTAAGATTACATTATGCAAATACTGGTGCTTATAATGCTGATTTCGAT 3399
Query 74067 GGAGATGAAATGAATGCTCATGCGCCTCAATCAGAAGAAAGTAAAGCTGA 74116
|| |||||||||||| ||| |||||| ||| | |||||||||
Sbjct 3400 GGTGATGAAATGAATATGCATTTCCCTCAAAATGAAAATGCTAAAGCTGA 3449
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 679811884686720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |