Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017-
04-24] 296 sequences; 15,098,268 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq253 87.8 2e-12
>seq253
Length=293773
Score = 87.8 bits (96), Expect = 2e-12
Identities = 160/232 (69%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594
|| || |||| ||| | ||| |||||||| | ||||| || ||||| ||||| || ||
Sbjct 106073 TGACCACCTCTTAATCTCAAGACTAAGTGCAATGTAGATTCCTTTTGGATGTTGTAGTCA 106132
Query 139595 CTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654
| || || ||||| | ||||||||||| |||| | |||||| || || ||
Sbjct 106133 GATAAAGTTCTACCATCTTCTAATTGTTTACCAGCGAAGATTAAACGTTGTTGGTCAGGT 106192
Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTC 139713
|| || ||||| || || ||| |||| | |||| | | || | ||||| | | ||
Sbjct 106193 GGAATACCTTCCTTATC-TTGAATTTTAGATTTAACGTTATCAATAGTGTCAGAAGATTC 106251
Query 139714 CACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|| || | || | ||||| || || || || || ||||| |||||||||
Sbjct 106252 AACTTCTAAAGTAATGGTCTTACCAGTTAAGGTCTTAACGAAGATTTGCATA 106303
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/213 (69%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 139553 AAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCT 139612
||||| || || | ||||| || ||||| ||||| || || | || || |||
Sbjct 106547 AAAACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCATCT 106606
Query 139613 TCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCG 139672
|| | ||||||||||| |||| | |||||| ||||| || || || ||||| || ||
Sbjct 106607 TCTAATTGTTTACCAGCGAAGATTAAACGTTGTTGATCAGGTGGGATACCTTCCTTATC- 106665
Query 139673 GTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGT 139731
||| |||| | ||| | | || | ||||| | | || || || | ||| | ||
Sbjct 106666 TTGAATTTTAGATTTGACGTTATCAATGGTGTCAGAAGATTCAACTTCTAAGGTAATAGT 106725
Query 139732 CTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
||| ||||| || ||||| ||||| ||||||||
Sbjct 106726 CTTACCGGTTAAAGTTTTAACGAAGATTTGCAT 106758
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496062164563200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |