Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017-
04-24] 296 sequences; 15,098,268 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq46 338 6e-88
>seq46
Length=215403
Score = 338 bits (374), Expect = 6e-88
Identities = 606/876 (69%), Gaps = 17/876 (2%)
Strand=Plus/Plus
Query 13351 TTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTA 13410
|||| ||||| || |||||||| ||| |||||| ||||| || ||||| || |||
Sbjct 149121 TTAGCCATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCGAAGAAGTTGGTCTTA 149180
Query 13411 CCTTCCAGTGATATATTTTCCATAAAATCGAATGGATTTGTTGACATAA-ACACTTTATC 13469
|| | | ||| || |||||||| ||||| |||||||| || ||||| | || || |
Sbjct 149181 CCAGCTAATGAAATGTTTTCCATGAAATCAAATGGATTAGT-GACATTGTAAACCTTCTT 149239
Query 13470 ACAACCTAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATC 13529
| ||| | | ||| ||||||||||||||||| ||| |||| |||||| ||||||| |
Sbjct 149240 ATTACCAAATGCTACTAATAATCTATCAGCAACAAATTCAACGTATTGACACATTAACTT 149299
Query 13530 ACAATTCATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGA 13589
||| |||||||||| | | ||||| | || ||| || ||||| ||||| ||||
Sbjct 149300 ACAGTTCATACCTAACAAACTAACAGGTAAGGCATCAGTGAAGAATTCCTTTTCAATAGC 149359
Query 13590 CACAGCCTCGTTTATAATAATCTT---AATAATGTCATTAGAAGGAGGATATTTTAGATG 13646
|||||||| | ||||||||| |||||| || || || || || | |||
Sbjct 149360 AACAGCCTC---AACAATAATCTTTTCAATAATTTCTGCAGCTGGTCTATTTTCCAAATG 149416
Query 13647 TTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTT 13706
|| | |||||| ||||||||| ||| | || |||||||||| || | ||||||
Sbjct 149417 GGAGAATAATAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAGATTAATTCGTT 149476
Query 13707 TGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGA 13766
|| |||||||| || ||||| || |||| || ||||||||||| || | ||||||||
Sbjct 149477 GGAGAATGTTAAACCAGGCATTAAACCTCTCTTCTTTAACCAAAAGATGGATGCGAATGA 149536
Query 13767 TCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGC 13826
|| ||||| || || ||||| ||||| || || | || || ||| |||| | ||
Sbjct 149537 ACCACTGAAGAAAATACCTTCAACAGCAGCGAATGCAACTAATCTTTCAGCAAATAAGGC 149596
Query 13827 TTTTTTGTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGT 13886
|| | || || |||||| | |||||| |||| || ||| ||||| | ||
Sbjct 149597 TTCATCGTCTGTGATCCATCTAAGAGCCCAGTCAGCCTTCTTTCTAATACATGGAATATG 149656
Query 13887 TTCGATTGCATTGAATAAATGTTC--CTTCTCTTTAG-TACTTGAAATGTATGTATCAAT 13943
|| || |||||||| |||| || |||| |||| | | |||| || || || || ||
Sbjct 149657 GTCAATAGCATTGAACAAATAGTCGGCTTC-CTTTGGATCCTTG--ATATAAGTGTCGAT 149713
Query 13944 AAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACA 14003
| | | ||| ||||||| || |||||||| || || || |||||||| || |
Sbjct 149714 TAAAAGGGAATAAGTTTCAGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAAGGA 149773
Query 14004 TCTAGCTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAAT 14063
| ||||||| ||| || || | | || |||| |||| ||||||||||| ||
Sbjct 149774 CTTGGCTTCTGGAATTTGAACTTCAGCTGAGAAGTTTTCAACCAAATTTTCATTAACGAT 149833
Query 14064 ACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTT 14123
|||||| ||| ||||| || || | || | ||| ||| | | || || | ||
Sbjct 149834 ACCATCTGAAGCAGCAAAGAACGCAAGGATTCTAGAAATGAAGAAACGTTCGTCGTCATT 149893
Query 14124 GAGT---TTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAA 14180
| | ||| |||||||| |||||| ||| | ||| | ||| || | ||||| ||
Sbjct 149894 TAATTTATTTCTCCAATCGTTTAAATCTTTACTTAAATCGATTTCTTCGGCAGTCCAGAA 149953
Query 14181 ACTAGCGACAGCTTTTTTATACATTACCCATATTTC 14216
| ||| |||| ||||| || | | ||| |||||
Sbjct 149954 AGAAGCTTCAGCCTTTTTGTAAAATTGCCAAATTTC 149989
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478587029221440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |