Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017-
04-24] 296 sequences; 15,098,268 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq253 111 2e-19
>seq253
Length=293773
Score = 111 bits (122), Expect = 2e-19
Identities = 163/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 142955 TGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCG 143014
|| || |||| ||| | ||| ||||| || | ||||||||| ||||| |||||||| ||
Sbjct 106073 TGACCACCTCTTAATCTCAAGACTAAGTGCAATGTAGATTCCTTTTGGATGTTGTAGTCA 106132
Query 143015 CTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 143074
| || || ||||| | |||||||||||| |||| | |||||| || || ||
Sbjct 106133 GATAAAGTTCTACCATCTTCTAATTGTTTACCAGCGAAGATTAAACGTTGTTGGTCAGGT 106192
Query 143075 GGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCT 143134
|| || ||||| || || |||||| ||| | | || | ||||| | | |||
Sbjct 106193 GGAATACCTTCCTTATCTTGAATTTTAGATTTAACGTTATCAATAGTGTCAGAAGATTCA 106252
Query 143135 ACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
||||| | ||| | ||||| || || || || || ||||| |||||||||
Sbjct 106253 ACTTCTAAAGTAATGGTCTTACCAGTTAAGGTCTTAACGAAGATTTGCATA 106303
Score = 107 bits (118), Expect = 2e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 142973 AAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCT 143032
||||| ||||| | |||||||| ||||| |||||||| || | || || |||
Sbjct 106547 AAAACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCATCT 106606
Query 143033 TCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCG 143092
|| | |||||||||||| |||| | |||||| ||||| || || || ||||| || ||
Sbjct 106607 TCTAATTGTTTACCAGCGAAGATTAAACGTTGTTGATCAGGTGGGATACCTTCCTTATCT 106666
Query 143093 GTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTC 143152
|||||| ||| | | || | ||||| | | ||| ||||| | || | |||
Sbjct 106667 TGAATTTTAGATTTGACGTTATCAATGGTGTCAGAAGATTCAACTTCTAAGGTAATAGTC 106726
Query 143153 TTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|| ||||| || ||||| ||||| ||||||||
Sbjct 106727 TTACCGGTTAAAGTTTTAACGAAGATTTGCAT 106758
Score = 105 bits (116), Expect = 7e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 142973 AAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCT 143032
||||| ||||| | |||||||| ||||| |||||||| || | || || |||
Sbjct 106319 AAAACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCATCT 106378
Query 143033 TCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCG 143092
|| | |||||||||||| |||| | |||||| ||||| || || || ||||| || ||
Sbjct 106379 TCTAATTGTTTACCAGCGAAGATTAAACGTTGTTGATCAGGTGGGATACCTTCCTTATCT 106438
Query 143093 GTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTC 143152
|||||| ||| | | || | ||||| | | ||| ||||| | ||| | |||
Sbjct 106439 TGAATTTTAGATTTAACGTTATCAATAGTGTCAGAAGATTCAACTTCTAAAGTAATGGTC 106498
Query 143153 TTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
|| || || || || || ||||| |||||||||
Sbjct 106499 TTACCAGTTAAGGTCTTAACGAAGATTTGCATA 106531
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 507012524046720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |