Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017-
04-24] 296 sequences; 15,098,268 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq79 98.7 2e-16
seq259 91.5 2e-14
>seq79
Length=192299
Score = 98.7 bits (108), Expect = 2e-16
Identities = 167/242 (69%), Gaps = 0/242 (0%)
Strand=Plus/Minus
Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517
|||||||||| ||||| || |||||||||||||| | | | ||| | | ||||| |
Sbjct 191120 GAGATAACATTCAAGGTATTACCAAGCCAGCTATTAGAAGATTAGCTAGAAGAGGTGGGG 191061
Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577
| |||||| | |||| || |||||||||| | | | ||| || || ||| |
Sbjct 191060 TTAAGCGTATTTCTGCTTTAATCTATGAAGAAGTCAGAGTTGTCTTAAAACAATTCTTAG 191001
Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637
| |||| ||| |||||| | |||||||| ||||| || | |||||||| || |
Sbjct 191000 AATCCGTCATCAGAGATGCTGTTACTTATACCGAACACGCCAAGAGAAAGACTGTTACTT 190941
Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTT 16697
|| ||||| | || || || || || | ||||| | | | |||||||| || |||
Sbjct 190940 CCTTGGATGTTGTTTACGCCTTAAAGAGACAAGGTAGAACCTTGTATGGTTTCGGTGGTT 190881
Query 16698 AA 16699
||
Sbjct 190880 AA 190879
>seq259
Length=73057
Score = 91.5 bits (100), Expect = 2e-14
Identities = 172/252 (68%), Gaps = 1/252 (0%)
Strand=Plus/Plus
Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507
|||||| | |||||||||| ||||| || || ||||||||||| | | | || |
Sbjct 46772 AGATCT-TGAGAGATAACATTCAAGGTATTACAAAGCCAGCTATTAGAAGATTAGCCAGA 46830
Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567
| ||||| || |||||| | |||| || |||||||||| | | | ||| || ||
Sbjct 46831 AGAGGTGGTGTTAAGCGTATTTCTGCTTTAATCTATGAAGAAGTCAGAGTTGTCTTAAAA 46890
Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627
||| | | |||| ||| |||||| | |||||||| ||||| || | |||
Sbjct 46891 CAATTCTTAGAATCCGTCATCAGAGATGCTGTTACTTATACCGAACACGCCAAGAGAAAG 46950
Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687
||||| || || | ||| | || ||||| || || | ||||| | | | ||||||
Sbjct 46951 ACTGTTACTTCTTTAGATGTTGTTTATGCTTTAAAGAGACAAGGTAGAACCTTATATGGT 47010
Query 16688 TTTGGAAGTTAA 16699
||||| |||||
Sbjct 47011 TTTGGTGGTTAA 47022
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074929365128
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |