Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017-
04-24] 296 sequences; 15,098,268 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq46 268 1e-66
>seq46
Length=215403
Score = 268 bits (296), Expect = 1e-66
Identities = 626/928 (67%), Gaps = 21/928 (2%)
Strand=Plus/Plus
Query 92781 ATTCTTATTCATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGT 92840
|| |||| |||||||||| ||||| || || |||| | ||||| ||||| || ||
Sbjct 149117 ATGCTTAGCCATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCGAAGAAGTTGGT 149176
Query 92841 CTTTCCTTCCAAAGATATCGAATTCACT---AGTGATTGGATTCTTGGCGTTATAATACT 92897
||| || | || || || | ||| | | | |||||| || | || ||| ||
Sbjct 149177 CTTACCAGCTAATGAAAT-GTTTTCCATGAAATCAAATGGATTAGTGACATTGTAAACCT 149235
Query 92898 TTTCACCGATCAACTCGTAC-AATAATCTATCAGCTACAAATTCTATGTACTGAGACATC 92956
| | | | ||| | ||| |||||||||||||| |||||||| | ||| ||| ||||
Sbjct 149236 TCTTATT-ACCAAATGCTACTAATAATCTATCAGCAACAAATTCAACGTATTGACACATT 149294
Query 92957 AAATCACAATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCG 93016
|| | ||| ||||| |||| | || ||||||| || || || ||||| || || ||
Sbjct 149295 AACTTACAGTTCATACCTAACAAACTAACAGGTAAGGCATCAGTGAAGAATTCCTTTTCA 149354
Query 93017 ATTACAACGGCTTCTTTCAAGATTTCTATTACTCTACTATTTGG---TGGTTTTTGTACG 93073
|| |||| || || ||| | | || || | || | | || |||| | | | |
Sbjct 149355 ATAGCAACAGCCTCAA-CAATAAT-CTTTT-CAATAATTTCTGCAGCTGGTCTATTTTCC 149411
Query 93074 ACATAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAAC 93133
| || | | | ||| || ||||| || |||||||||||||| |||| | || ||
Sbjct 149412 AAATGGGAGAATAATAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAGATTAAT 149471
Query 93134 TCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCA 93193
|| ||| |||||||||||| || | | |||| ||||| | |||||| || || ||
Sbjct 149472 TCGTTGGAGAATGTTAAACCAGGCATTAAACCTCTCTTCTTTAACCAAAAGATGGATGCG 149531
Query 93194 AAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAA 93253
|| |||| || || |||||||| || || || ||||| || | | ||| |||||
Sbjct 149532 AATGAACCACTGAAGAAAATACCTTCAACAGCAGCGAATGCAACTAATCTTTCAGCAAAT 149591
Query 93254 TTTGCGGAATTA-CTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGG 93312
|| || ||| |||||||| | | |||||| || || || || ||||||| ||
Sbjct 149592 AAGGCTTCATCGTCTG-TGATCCATCTAAGAGCCCAGTCAGCCTTCTTTCTAATACATGG 149650
Query 93313 TAGTGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATC 93372
| || ||||| || || | || || || | | ||| || || || ||
Sbjct 149651 AATATGGTCAATAGCATTGAACAAATAGTCGGCTTCCTTTGGATCCTTGATATAAGTGTC 149710
Query 93373 GATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAA 93432
|||||| || ||||| |||||||||| | || ||||| |||||||| || |||||
Sbjct 149711 GATTAAAAGGGAATAAGTTTCAGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAA 149770
Query 93433 ACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGAC 93492
| | ||||| | || || ||||| || || | || || | ||||||||| ||
Sbjct 149771 GGACTTGGCTTCTGGAATTTGAACTTCAGCTGAGAAGTTTTCAACCAAATTTTCATTAAC 149830
Query 93493 TATACCATCGGATGCTGCaaaaaaaGCCAATAT---ATGCTTTATAAAATGTTTCTCATC 93549
|||||||| || || ||||| || || | || | | | ||| ||| || ||
Sbjct 149831 GATACCATCTGAAGCAGCAAAGAACGCAAGGATTCTAGAAATGAAGAAACGTTCGTCGTC 149890
Query 93550 ATCTTTAAGCT-TATC-CCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTC 93607
|| |||| | | || ||||||| || |||||| | ||||| ||||||| |||||
Sbjct 149891 AT--TTAATTTATTTCTCCAATCGTTTAAATCTTTACTTAAATCGATTTCTTCGGCAGTC 149948
Query 93608 CAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAAT 93667
|| || || ||||| || |||||||| | | ||| || || || || |||||| ||
Sbjct 149949 CAGAAAGAAGCTTCAGCCTTTTTGTAAAATTGCCAAATTTCATGGAATCTAATTGGGAAC 150008
Query 93668 ATGACAAAACGATTAGGGTTATCTTTTA 93695
|||||||||||| |||||| || ||||
Sbjct 150009 ATGACAAAACGACGAGGGTTCTCCTTTA 150036
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556858739615040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |