Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017- 04-24] 296 sequences; 15,098,268 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq276 109 5e-19 >seq276 Length=61907 Score = 109 bits (120), Expect = 5e-19 Identities = 164/232 (71%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 20353 AGCTA-CATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCG 20411 ||||| ||||||||||||| || | ||||| || || || ||||| | || || | Sbjct 8618 AGCTAACATAAAATTGACAAAAGACATGACATGGTGGGAGTGCCATTTTAGCAAAATCAG 8677 Query 20412 CCGGGTTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCA 20471 |||||||| ||| |||| || ||||||||||| | ||||| | |||| | | | Sbjct 8678 GTGGGTTCCAAGCAGACATGATAATTCTTCTATCATATGGATTCGTCTTTAATTTCTTTA 8737 Query 20472 CAATGTACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACG 20531 || | ||||| ||| | || || || ||||| |||||||| ||||| || Sbjct 8738 TAACATCTTGTAATTGATCATATCCTTGACCGGTATAATCAGCATCACAATCCACATATT 8797 Query 20532 CCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTC 20583 | || ||||| || ||||| |||||||| ||||| || || ||||| || || Sbjct 8798 CAGCACCAAAATGTCTCCATTGGAAACCATAAACCGGACCTAAATCACCTTC 8849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441371166920640