Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017-
04-24] 296 sequences; 15,098,268 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq46 87.8 2e-12
>seq46
Length=215403
Score = 87.8 bits (96), Expect = 2e-12
Identities = 292/452 (65%), Gaps = 2/452 (0%)
Strand=Plus/Minus
Query 93928 CCACAGATGTCTTCGTGTTTCCTGATGACGAACAAGGCCGACTCCATCTCCGGAATTTTC 93987
||||| |||||||| |||||| | | | | |||| || || || || ||||
Sbjct 192859 CCACAAATGTCTTCTTGTTTCTTAGTTGCAATGAAGGAAGATTCTATTGATGGTATTTAT 192800
Query 93988 GACAGCCTCAAGGACT-GTGCGACCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGT 94046
|| | | | || |||| |||| |||||||| || || || || || | | |
Sbjct 192799 GATA-CTTTAAAGACTTGTGCTTTAATCTCAAAGAGTGCTGGTGGTATTGGTTTACATAT 192741
Query 94047 CCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCT 94106
|| || | ||||||| ||| | || || ||||| ||||| || |||||||| |
Sbjct 192740 TCATAACATTCGTGCCACTGGTGCTTATATTGCTGGTACTAATGGTACTTCCAACGGTAT 192681
Query 94107 CGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAG 94166
| | |||||| |||| ||||||||||| | || || || || || || |||||| |
Sbjct 192680 CATTCCTATGGTCCGTGTCTTCAACAATACTGCTCGTTATGTTGATCAAGGTGGTAACAA 192621
Query 94167 GAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCAT 94226
||| ||| |||| || | ||| | || || ||||| || || | | ||||||
Sbjct 192620 GAGACCAGGTGCTTTTGCTCTTTATTTAGAACCATGGCATGCTGATATTTTTGATTTCAT 192561
Query 94227 CGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCT 94286
|| | ||||||| || || || || || || ||||| | ||| ||| |
Sbjct 192560 TGATATTAGAAAGAATCAAGGTAAAGAAGAAATTAGAGCAAGAGATTTATTCCCAGCTTT 192501
Query 94287 CTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTG 94346
||| | ||||| | || ||||| | || || ||||| | |||| | | || |
Sbjct 192500 ATGGATTCCAGATTTATTCATGAAGAGAGTTGAACAAAACGGTGATTGGACTTTATTCTC 192441
Query 94347 TCCCAATGAATGTCCCGGACTGTCCGACGTTT 94378
||| |||||| ||| ||| | | || ||||
Sbjct 192440 TCCAAATGAAGCTCCAGGATTACCAGATGTTT 192409
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494721369524160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |