Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017- 04-24] 296 sequences; 15,098,268 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq46 87.8 2e-12 >seq46 Length=215403 Score = 87.8 bits (96), Expect = 2e-12 Identities = 292/452 (65%), Gaps = 2/452 (0%) Strand=Plus/Minus Query 93928 CCACAGATGTCTTCGTGTTTCCTGATGACGAACAAGGCCGACTCCATCTCCGGAATTTTC 93987 ||||| |||||||| |||||| | | | | |||| || || || || |||| Sbjct 192859 CCACAAATGTCTTCTTGTTTCTTAGTTGCAATGAAGGAAGATTCTATTGATGGTATTTAT 192800 Query 93988 GACAGCCTCAAGGACT-GTGCGACCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGT 94046 || | | | || |||| |||| |||||||| || || || || || | | | Sbjct 192799 GATA-CTTTAAAGACTTGTGCTTTAATCTCAAAGAGTGCTGGTGGTATTGGTTTACATAT 192741 Query 94047 CCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCT 94106 || || | ||||||| ||| | || || ||||| ||||| || |||||||| | Sbjct 192740 TCATAACATTCGTGCCACTGGTGCTTATATTGCTGGTACTAATGGTACTTCCAACGGTAT 192681 Query 94107 CGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAG 94166 | | |||||| |||| ||||||||||| | || || || || || || |||||| | Sbjct 192680 CATTCCTATGGTCCGTGTCTTCAACAATACTGCTCGTTATGTTGATCAAGGTGGTAACAA 192621 Query 94167 GAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCAT 94226 ||| ||| |||| || | ||| | || || ||||| || || | | |||||| Sbjct 192620 GAGACCAGGTGCTTTTGCTCTTTATTTAGAACCATGGCATGCTGATATTTTTGATTTCAT 192561 Query 94227 CGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCT 94286 || | ||||||| || || || || || || ||||| | ||| ||| | Sbjct 192560 TGATATTAGAAAGAATCAAGGTAAAGAAGAAATTAGAGCAAGAGATTTATTCCCAGCTTT 192501 Query 94287 CTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTG 94346 ||| | ||||| | || ||||| | || || ||||| | |||| | | || | Sbjct 192500 ATGGATTCCAGATTTATTCATGAAGAGAGTTGAACAAAACGGTGATTGGACTTTATTCTC 192441 Query 94347 TCCCAATGAATGTCCCGGACTGTCCGACGTTT 94378 ||| |||||| ||| ||| | | || |||| Sbjct 192440 TCCAAATGAAGCTCCAGGATTACCAGATGTTT 192409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494721369524160