Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017-
04-24] 296 sequences; 15,098,268 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq253 149 4e-31
seq254 131 1e-25
>seq253
Length=293773
Score = 149 bits (164), Expect = 4e-31
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| |||||||||||| ||||| | ||||| || ||||| |||||||| ||
Sbjct 106532 CCACCTCTCAATCTTAAAACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCAGAT 106591
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
| | |||| | |||||||||||||| |||||| | || ||||| ||||| || |||
Sbjct 106592 AAAGTTCTACCATCTTCTAATTGTTTACCAGCGAAGATTAAACGTTGTTGATCAGGTGGG 106651
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| |||||||| || |||||| ||| || | || || || || | ||| ||
Sbjct 106652 ATACCTTCCTTATCTTGAATTTTAGATTTGACGTTATCAATGGTGTCAGAAGATTCAACT 106711
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
||||||||||| || ||||| || | |||||| || || ||||||||
Sbjct 106712 TCTAAGGTAATAGTCTTACCGGTTAAAGTTTTAACGAAGATTTGCAT 106758
Score = 145 bits (160), Expect = 5e-30
Identities = 169/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| |||||||||||| ||||| | ||||| || ||||| |||||||| ||
Sbjct 106304 CCACCTCTCAATCTTAAAACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCAGAT 106363
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
| | |||| | |||||||||||||| |||||| | || ||||| ||||| || |||
Sbjct 106364 AAAGTTCTACCATCTTCTAATTGTTTACCAGCGAAGATTAAACGTTGTTGATCAGGTGGG 106423
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| |||||||| || |||||| ||| || | || ||||| || | ||| ||
Sbjct 106424 ATACCTTCCTTATCTTGAATTTTAGATTTAACGTTATCAATAGTGTCAGAAGATTCAACT 106483
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
||||| |||||||| ||||| || | || || || || |||||||||
Sbjct 106484 TCTAAAGTAATGGTCTTACCAGTTAAGGTCTTAACGAAGATTTGCATA 106531
Score = 141 bits (156), Expect = 7e-29
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| ||||| || ||||| || | ||||| || ||||| |||||||| ||
Sbjct 106076 CCACCTCTTAATCTCAAGACTAAGTGCAATGTAGATTCCTTTTGGATGTTGTAGTCAGAT 106135
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
| | |||| | |||||||||||||| |||||| | || ||||| |||||||| ||||
Sbjct 106136 AAAGTTCTACCATCTTCTAATTGTTTACCAGCGAAGATTAAACGTTGTTGGTCAGGTGGA 106195
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| |||||||| || |||||| ||| || | || ||||| || | ||| ||
Sbjct 106196 ATACCTTCCTTATCTTGAATTTTAGATTTAACGTTATCAATAGTGTCAGAAGATTCAACT 106255
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
||||| |||||||| ||||| || | || || || || |||||||||
Sbjct 106256 TCTAAAGTAATGGTCTTACCAGTTAAGGTCTTAACGAAGATTTGCATA 106303
>seq254
Length=76587
Score = 131 bits (144), Expect = 1e-25
Identities = 168/232 (72%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| |||||||| || || || | ||||| || ||||| |||||||| ||
Sbjct 42914 CCACCTCTTAATCTTAAGACCAAGTGTAAAGTAGATTCCTTTTGGATGTTGTAGTCAGAT 42973
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
| | |||| | ||||||||||| || ||||| | || || | ||||| || ||||
Sbjct 42974 AAAGTTCTACCATCTTCTAATTGCTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGA 43033
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| |||||||| || || ||| ||| ||| | || || || ||| | ||| ||
Sbjct 43034 ATACCTTCCTTATCTTGGATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCGACT 43093
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTG 15181
|||||||||||||| ||||| || | || || || ||||||||||| ||||
Sbjct 43094 TCTAAGGTAATGGTCTTACCAGTTAAGGTCTTGACGAAAATTTGCATTTTTG 43145
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357390710708360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |