Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017-
04-24] 296 sequences; 15,098,268 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq253 125 6e-24
seq254 107 2e-18
>seq253
Length=293773
Score = 125 bits (138), Expect = 6e-24
Identities = 159/216 (74%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| |||| |||| || |||||||||||||| || || || | ||| || |
Sbjct 106088 CTCAAGACTAAGTGCAATGTAGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCA 106147
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| || |||||||| || ||| | || || ||||| ||||| || ||||| ||||| |||
Sbjct 106148 TCTTCTAATTGTTTACCAGCGAAGATTAAACGTTGTTGGTCAGGTGGAATACCTTCCTTA 106207
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
||||||| |||| | || | || | || | ||||| ||||| || ||||| | |||||
Sbjct 106208 TCTTGAA-TTTTAGATTTAACGTTATCAATAGTGTCAGAAGATTCAACTTCTAAAGTAAT 106266
Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || |||| || || || || ||||||||
Sbjct 106267 GGTCTTACCAGTTAAGGTCTTAACGAAGATTTGCAT 106302
Score = 125 bits (138), Expect = 6e-24
Identities = 159/216 (74%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
|| || || | ||| | || |||||||||||||| || || || | ||| || |
Sbjct 106544 CTTAAAACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCA 106603
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| || |||||||| || ||| | || || ||||| || || || || || ||||| |||
Sbjct 106604 TCTTCTAATTGTTTACCAGCGAAGATTAAACGTTGTTGATCAGGTGGGATACCTTCCTTA 106663
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
||||||||||| ||||| || | || | |||||| ||||| || ||||| | ||||
Sbjct 106664 TCTTGAATTTTAGATTTGA-CGTTATCAATGGTGTCAGAAGATTCAACTTCTAAGGTAAT 106722
Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || ||||||| |||||| || || ||||||||
Sbjct 106723 AGTCTTACCGGTTAAAGTTTTAACGAAGATTTGCAT 106758
Score = 107 bits (118), Expect = 2e-18
Identities = 155/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
|| || || | ||| | || |||||||||||||| || || || | ||| || |
Sbjct 106316 CTTAAAACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCA 106375
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| || |||||||| || ||| | || || ||||| || || || || || ||||| |||
Sbjct 106376 TCTTCTAATTGTTTACCAGCGAAGATTAAACGTTGTTGATCAGGTGGGATACCTTCCTTA 106435
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
||||||| |||| | || | || | || | ||||| ||||| || ||||| | |||||
Sbjct 106436 TCTTGAA-TTTTAGATTTAACGTTATCAATAGTGTCAGAAGATTCAACTTCTAAAGTAAT 106494
Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || |||| || || || || ||||||||
Sbjct 106495 GGTCTTACCAGTTAAGGTCTTAACGAAGATTTGCAT 106530
>seq254
Length=76587
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 45144 GTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCT 45203
|| |||||||||||||| || || || | ||| || ||| || ||||| || ||
Sbjct 42944 GTAGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCATCTTCTAATTGCTTACCA 43003
Query 45204 GCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTG 45263
|| | || |||| ||| || || || ||||| ||||| |||||||| || || ||||
Sbjct 43004 GCAAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCCTTATCTTGGATCTTGGATTTG 43063
Query 45264 ATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTT 45323
| || | |||||||||||| |||||||| | |||| || || || |||| ||
Sbjct 43064 ACATTGTCAATGGTGTCGGAAGATTCGACTTCTAAGGTAATGGTCTTACCAGTTAAGGTC 43123
Query 45324 TTTACAAAAATTTGCAT 45340
|| || |||||||||||
Sbjct 43124 TTGACGAAAATTTGCAT 43140
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452001527588160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |