Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017-
04-24] 296 sequences; 15,098,268 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq253 100 7e-16
seq254 95.1 3e-14
>seq253
Length=293773
Score = 100 bits (110), Expect = 7e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| ||| | ||| | || || |||||||||| ||||||||||| ||||| || ||
Sbjct 106087 TCTCAAGACTAAGTGCAATGTAGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACC 106146
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|||||| | || || || |||||||| | ||| || ||||| || ||| |||||
Sbjct 106147 ATCTTCTAATTGTTTACCAGCGAAGATTAAACGTTGTTGGTCAGGTGGAATACCTTCCTT 106206
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| ||||| || || ||| || | ||||| | | ||| || || || || ||
Sbjct 106207 ATCTTGAATTTTAGATTTAACGTTATCAATAGTGTCAGAAGATTCAACTTCTAAAGTAAT 106266
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|||||||| || | || || || || |||||
Sbjct 106267 GGTCTTACCAGTTAAGGTCTTAACGAAGATTTG 106299
Score = 100 bits (110), Expect = 7e-16
Identities = 139/195 (71%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 199432 AGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCC 199491
||| || |||||||||| ||||||||||| ||||| || |||||||| | || || ||
Sbjct 106561 AGTAGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCATCTTCTAATTGTTTACC 106620
Query 199492 GGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTT 199551
|||||||| | ||| || || || || || ||||| || ||||| || ||
Sbjct 106621 AGCGAAGATTAAACGTTGTTGATCAGGTGGGATACCTTCCTTATCTTGAATTTTAGATTT 106680
Query 199552 CACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGT 199611
||| || | |||||| | | ||| || || || || || |||||||| || | |||
Sbjct 106681 GACGTTATCAATGGTGTCAGAAGATTCAACTTCTAAGGTAATAGTCTTACCGGTTAAAGT 106740
Query 199612 TTTCACAAAAATTTG 199626
||| || || |||||
Sbjct 106741 TTTAACGAAGATTTG 106755
Score = 86.0 bits (94), Expect = 1e-11
Identities = 136/195 (70%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 199432 AGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCC 199491
||| || |||||||||| ||||||||||| ||||| || |||||||| | || || ||
Sbjct 106333 AGTAGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCATCTTCTAATTGTTTACC 106392
Query 199492 GGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTT 199551
|||||||| | ||| || || || || || ||||| || ||||| || ||
Sbjct 106393 AGCGAAGATTAAACGTTGTTGATCAGGTGGGATACCTTCCTTATCTTGAATTTTAGATTT 106452
Query 199552 CACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGT 199611
||| || | ||||| | | ||| || || || || || |||||||| || | ||
Sbjct 106453 AACGTTATCAATAGTGTCAGAAGATTCAACTTCTAAAGTAATGGTCTTACCAGTTAAGGT 106512
Query 199612 TTTCACAAAAATTTG 199626
|| || || |||||
Sbjct 106513 CTTAACGAAGATTTG 106527
>seq254
Length=76587
Score = 95.1 bits (104), Expect = 3e-14
Identities = 158/228 (69%), Gaps = 3/228 (1%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||| | ||| | ||| | ||| || |||||||||| ||||||||||| ||||| || ||
Sbjct 42925 TCTTAAGACCAAGTGTAAAGTAGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACC 42984
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|||||| | ||||| || || ||||| | | || || || || ||| |||||
Sbjct 42985 ATCTTCTAATTGCTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCCTT 43044
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| || ||||| || || || | |||||| | | ||| || || || || ||
Sbjct 43045 ATCTTGGATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCTAAGGTAAT 43104
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTTAGCCTT 199641
|||||||| || | || || || |||||||| |||||| | |||
Sbjct 43105 GGTCTTACCAGTTAAGGTCTTGACGAAAATTTG---CATTTTTGGCTT 43149
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178917128939832
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |