Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017-
04-24] 296 sequences; 15,098,268 total letters
Query= NC_013797.1
Length=108592
Score E
Sequences producing significant alignments: (Bits) Value
seq253 86.0 4e-12
seq260 82.4 5e-11
>seq253
Length=293773
Score = 86.0 bits (94), Expect = 4e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| |||| ||| | | |||||||| ||||| ||| ||||| || || || || |
Sbjct 106532 CCACCTCTCAATCTTAAAACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCAGAT 106591
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
||| | |||| || |||||||| || | || |||||||| || ||||| | ||
Sbjct 106592 AAAGTTCTACCATCTTCTAATTGTTTACCAGCGAAGATTAAACGTTGTTGATCAGGTGGG 106651
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| ||||| || || ||||| ||| | | | | ||||| | ||| ||
Sbjct 106652 ATACCTTCCTTATCTTGAATTTTAGATTTGACGTTATCAATGGTGTCAGAAGATTCAACT 106711
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
|| || ||||| || ||||| ||||||||||| |||||||| |||||
Sbjct 106712 TCTAAGGTAATAGTCTTACCGGTTAAAGTTTTAACGAAGATTTGCAT 106758
>seq260
Length=72409
Score = 82.4 bits (90), Expect = 5e-11
Identities = 95/128 (74%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 42515 TTACCTAAATCACCAAGATGTCGTTCTTCATCATGCGGTCCGCCGTGTTCTTTATGAAAA 42574
|||||||||||||||| ||||| || ||||| | || | || || ||| || ||
Sbjct 50951 TTACCTAAATCACCAACATGTCTCTCGTCATCTTCTGGAGCACCATGAGTTTTTTGGAAT 50892
Query 42575 GGATTAAAATGTTCACCAGCCGATGTACATCCATTGGTGGTATCTCCAAATTCATGTATA 42634
|| ||||| || |||||| || ||||| || |||||| | || ||||||| ||| | |
Sbjct 50891 GGGTTAAAGTGAGGACCAGCAGAAGTACAACCGTTGGTGTTGTCACCAAATTGATGGACA 50832
Query 42635 TGAAAACC 42642
|| |||||
Sbjct 50831 TGGAAACC 50824
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 347368346864168
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |