Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017-
04-24] 296 sequences; 15,098,268 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq46 210 3e-49
seq217 98.7 1e-15
>seq46
Length=215403
Score = 210 bits (232), Expect = 3e-49
Identities = 833/1297 (64%), Gaps = 29/1297 (2%)
Strand=Plus/Minus
Query 111720 CCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCA 111779
||||| | || || |||||||| |||| || |||||||| ||||||| | |||||
Sbjct 192889 CCAACTTTATTTAATGCTGGTACTCCAAACCCACAAATGTCTTCTTGTTTCTTAGTTGCA 192830
Query 111780 AACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCA 111839
| ||||| ||||| || |||| ||||| | ||| | | ||||| |||||||
Sbjct 192829 ATGAAGGAAGATTCTATTGATGGTATTTATGATACTTTAAAGACTTGTGCTTTAATCTCA 192770
Query 111840 AAGTGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGT-CTCGTAT 111898
||| | ||||||||||| || | || || ||| | | | ||| || || || |||
Sbjct 192769 AAGAGTGCTGGTGGTATTGGTTTACATATTCATAACATTCGTGCC-ACTGGTGCTTATAT 192711
Query 111899 TAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCAC 111958
| ||||| |||||| || | ||||| ||||| ||| | || || || ||| ||
Sbjct 192710 TGCTGGTACTAATGGTACTTCCAACGGTATCATTCCTATGGTCCGTGTCTTCAACAATAC 192651
Query 111959 AGCGCGCTATGTAAACCAAGCTGGGCGTCGCAAG------GGATCTATCGCAGTCTATCT 112012
|| || ||||| | |||| || || |||| || || | || | ||| |
Sbjct 192650 TGCTCGTTATGTTGATCAAGGTG---GTAACAAGAGACCAGGTGCTTTTGCTCTTTATTT 192594
Query 112013 TGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGA 112072
|| |||||||| || ||||| | || ||| |||| | | || |||||| | ||
Sbjct 192593 AGAACCATGGCATGCTGATATTTTTGATTTCATTGATATTAGAAAGAATCAAGGTAAAGA 192534
Query 112073 GGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAG 112132
|| | | ||| | ||| | ||| | |||||||||||| | |||||||||||
Sbjct 192533 AGAAATTAGAGCAAGAGATTTATTCCCAGCTTTATGGATTCCAGATTTATTCATGAAGAG 192474
Query 112133 AGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGA 112192
|||||| | | || ||||| || | || | |||| | | || || || | | ||
Sbjct 192473 AGTTGAACAAAACGGTGATTGGACTTTATTCTCTCCAAATGAAGCTCCAGGATTACCAGA 192414
Query 112193 TGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGAC 112252
|| ||||| || ||||| | || ||| || || ||| |||| | |
Sbjct 192413 TGTTTACGGTGATGAATTTGAGCAATTATATGAAAAATATGAAAGAGAGGGTCGTGGTAG 192354
Query 112253 TGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGG 112312
|| || |||| | | ||| | | ||| | | ||||||| || |||||
Sbjct 192353 ACAAACCGTTAAAGCTCAAAAATTATGGTATTCCATTTTAGAAGCTCAAACTGAAACTGG 192294
Query 112313 TACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGG 112372
||| |||| |||| | || ||||| || ||||| ||| ||||||||||| |||||
Sbjct 192293 TACTCCATTTATGTTATATAAAGATGCTTGTAATAGAAAATCCAATCAAAAGAACTTGGG 192234
Query 112373 TGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGAC 112432
| |||| || |||||| | ||| ||||| | |||| | | | ||| ||
Sbjct 192233 TATGATTAAATCTTCCAATTTATGTTGTGAAATTGTTGAATATTCTTCCCCAGAAGAAGT 192174
Query 112433 GGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGA- 112491
||||| || || | || ||||| ||| | || | ||| || | ||| | ||
Sbjct 192173 TGCTGTTTGCAATTTAGCTTCAATTGCTTTACCATCATTTGTTGA--AAAAGATGATGAT 192116
Query 112492 CATT-------TGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTA 112544
|||| | ||| |||||| | || ||||| || || ||| || || ||
Sbjct 192115 CATTCTTGGTATAATTTCGAAAAATTACATGAAGTCACAAAGGTTGTTACTCGTAATTTA 192056
Query 112545 AACAGAGTTATTGATAGAAATTTTTACCCCGTT-GAGACTGCTCGTAAATCTAATATGAG 112603
|| | ||| |||||| | || | ||| || ||| ||| ||| | || || ||||
Sbjct 192055 AATAAAGTCATTGATCGTAACTATTATCCAGTTCCAGA-AGCTAAGACTTCCAACATGAA 191997
Query 112604 ACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT-TCTTTGTCGCC 112662
| | ||||||| | | ||||| |||||| | || ||| ||||| | ||
Sbjct 191996 GAATAGACCAATTGCTTTAGGTGTTCAAGGTTTAGCCGATTCCTTCATGGCCTTAAGATT 191937
Query 112663 ACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATC 112722
|| |||||||||| | ||||| | ||| | || | || ||||| || || ||||
Sbjct 191936 AC-CATTTGATTCTCAAGAAGCTAGAGAATTAAACATTCAAATTTTTGAAACCATTTATC 191878
Query 112723 ACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTG 112782
| || ||| |||| | | || || || | | || ||| |||| |||| |
Sbjct 191877 ATGCAGCTGTTGAAACTTCTATTGAATTAGCTCAAGAAGAAGGTGCATACCAAACATACC 191818
Query 112783 AGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC 112842
| ||||| |||||||| ||||| | | ||||||||| | ||| | | || |||| |
Sbjct 191817 AAGGTTCCCCAGCTTCGCAAGGATTATTACAATTTGATTTATGGAATAGAAAG-CCAA-C 191760
Query 112843 TTCACTA--CGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAG 112900
| | || || ||||| | | || || || | | ||| | | ||
Sbjct 191759 TGAATTATGGGATTGGGATACATTAAAACAAAATATGGCCAAACATGGTTTAAGAAATTC 191700
Query 112901 TCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATG 112960
||||||| | || || |||||||| || || || | |||||||||||||||||||||||
Sbjct 191699 TCTTTTGGTTGCTCCTATGCCAACTGCTTCTACTTCCCAAATCTTGGGTAATAATGAATG 191640
Query 112961 CTTTGAACCCTACACGACGAACATCTATCTGAGAAGA 112997
|||||||| || || | ||||| ||| |||||||
Sbjct 191639 TTTTGAACCATATACTTCAAACATTTATTCGAGAAGA 191603
>seq217
Length=263222
Score = 98.7 bits (108), Expect = 1e-15
Identities = 184/268 (69%), Gaps = 2/268 (1%)
Strand=Plus/Plus
Query 163445 GCTGTTGGATACGATCTTTACAGCA-CTGATGAAGTTGTTATTCCACCTACACACCGCGC 163503
|||| |||||||||||||| ||| | | |||| |||||||||| || | |
Sbjct 144142 GCTGCCGGATACGATCTTTAT-GCATCCCAAGAAGGTGTTATTCCAGCTCATGGACAAGG 144200
Query 163504 TCTTATCGGGACGGGTGTAGCCATTGTACTGCCACCGGGTGTCTATGGGCGTGTTGCGCC 163563
||||||| || | | | ||||| | | || ||| ||||| |||||||| ||
Sbjct 144201 TCTTATCTCTACTGATATTTCCATTATTGTTCCTGAAGGTACTTATGGTCGTGTTGCTCC 144260
Query 163564 ACGATCTGGTCTCGCTGTGAAACACGGTATCCAAGTTGGTGCGGGTGTTATTGATCCCGA 163623
|| ||||| | ||||| || || ||||| |||||| |||||||||||| | ||
Sbjct 144261 TCGTTCTGGATTAGCTGTTAAGCATGGTATTTCTACTGGTGCTGGTGTTATTGATGCTGA 144320
Query 163624 CTACACGGGTGAAGTCAAAGTCGTTCTCTTCAATCATGGAGACAAAGACTTTGAGGTAAA 163683
|| | |||||||| || || ||| | || |||||| ||| || || ||||| || ||
Sbjct 144321 TTATAGAGGTGAAGTTAAGGTTGTTTTATTTAATCATTCAGATAAGGATTTTGAAGTTAA 144380
Query 163684 GAGGGGGGAGCGCATCGCACAACTTGTT 163711
| || || | || |||||| | |||
Sbjct 144381 GGCTGGTGATAGAATTGCACAATTGGTT 144408
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620740103253120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |