Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017-
04-24] 296 sequences; 15,098,268 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq46 221 1e-52
>seq46
Length=215403
Score = 221 bits (244), Expect = 1e-52
Identities = 742/1139 (65%), Gaps = 31/1139 (3%)
Strand=Plus/Plus
Query 110103 ATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGC 110162
||| |||| ||| |||||||| | | |||| || | || ||||||||| || |||
Sbjct 191957 ATCGGCTAAACCTTGAACACCTAAAGCAATTGGTCTATTCTTCATGTTGGAA-GTCTT-- 192013
Query 110163 AGTTTCT---ACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGT 110219
|| |||| || || ||| |||| || || ||||| ||| | ||| || |||
Sbjct 192014 AGCTTCTGGAACTGGATAATAGTTACGATCAATGACTTTATTTAAATTACGAGTAACAAC 192073
Query 110220 CTTCGTGATTTCATGGAGTTTGTCGTAATCGAACG-----TTTTCGTCTCCTTATTGA-C 110273
||| |||| |||||| | ||| ||| ||| || | || || ||| || | |
Sbjct 192074 CTTTGTGACTTCATGTAATTTTTCGAAATTATACCAAGAATGATCATCATCTTTTTCAAC 192133
Query 110274 ATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTA 110333
| || || | |||||| || || | |||||| |||| | || ||| | | ||
Sbjct 192134 AAATGATGGTAAAGCAATTGAAGCTAAATTGCAAACAGCAACTTCTTCTGGGGAAGAATA 192193
Query 110334 TTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGA 110393
||| | |||||| ||| || |||||| ||||| | |||||||||||| ||||| ||
Sbjct 192194 TTCAACAATTTCACAACATAAATTGGAAGATTTAATCATACCCAAGTTCTTTTGATTGGA 192253
Query 110394 TTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTT 110453
||| || || ||||| ||||| | ||| |||| ||||||||||| || || | |
Sbjct 192254 TTTTCTATTACAAGCATCTTTATATAACATAAATGGAGTACCAGTTTCAGTTTGAGCTTC 192313
Query 110454 GAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTC 110513
| ||||| | ||||| | || || ||| || | |||| || ||
Sbjct 192314 TAAAATGGAATACCATAATTTTTGAGCTTTAACGGTTTGTCTACCACGACCCTCTCTTTC 192373
Query 110514 GTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTT 110573
|| || || || | ||||||||| | ||||| ||||| | | || || |
Sbjct 192374 ATATTTTTCATATAATTGCTCAAATTCATCACCGTAAACATCTGGTAATCCTGGAGCTTC 192433
Query 110574 GTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGG 110633
| ||| |||| | | ||||| || | ||||| ||||||||||| | || ||
Sbjct 192434 ATTTGGAGAGAATAAAGTCCAATCACCGTTTTGTTCAACTCTCTTCATGAATAAATCTGG 192493
Query 110634 AATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCG 110693
|||||| | || | ||| | || | | | ||||| | |||||| || |
Sbjct 192494 AATCCATAAAGCTGGGAATAAATCTCTTGCTCTAATTTCTTCTTTACCTTGATTCTTTCT 192553
Query 110694 TAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGA------- 110746
| || | || || | ||||| | ||||||||||| | ||| | ||| |
Sbjct 192554 AATATCAATGAAATCAAAAATATCAGCATGCCATGGTTCTAAATAAAGAGCAAAAGCACC 192613
Query 110747 TGGATCCCTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGA 110806
||| || ||| || ||| || | |||||| || || || |||||||| | ||
Sbjct 192614 TGG-TCTCTTGTTACCACCT---TGATCAACATAACGAGCAGTATTGTTGAAGACACGGA 192669
Query 110807 GCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAAT-TCTGGACTTATTGGCA 110865
||||||||| || || | ||| |||||| ||||| ||| | | || | |||||
Sbjct 192670 CCATAGGAATGATACCGTTGGAAGTACCATTAGTACCAGCAATATAAGCACC-AGTGGCA 192728
Query 110866 CGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACAC-TC 110924
||||||| || ||||| | |||||||||||| || | ||| ||| ||||| ||
Sbjct 192729 CGAATGTTATGAATATGTAAACCAATACCACCAGCACTCTTTGAGATTAAAGCACAAGTC 192788
Query 110925 TGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGA 110984
| | | ||| |||||||||||||||| |||||| |||| | |||| || || |||||
Sbjct 192789 TTTAAA-GTATCATAAATACCATCAATAGAATCTTCCTTCATTGCAACTAAGAAACAAGA 192847
Query 110985 AGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAG 111044
|||||| || || || || || ||||| || | || || | ||||| | ||
Sbjct 192848 AGACATTTGTGGGTTTGGAGTACCAGCATTAAATAAAGTTGGAGAACCATGAGTAAAATA 192907
Query 111045 ACCTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACC 111104
||||||||| || || | || | | || | ||| | ||| ||||||||
Sbjct 192908 TTTTTGGGACATTAAATTATAAGATTCAATAACTCTTGGAATATCATCACCATGAATACC 192967
Query 111105 AATGGCAACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTT-CCATCAACACGCT 111163
||| ||||||| ||||| | || ||| || |||| | | |||| |||| ||||||
Sbjct 192968 AATAGCAACTCTCATGATTAAATGTTGTGGTCTTTC-AGCAACTTTACCATTAACACGTA 193026
Query 111164 GAAGGTA-ACTCTTCTCTAGGGTCTTGAGACCAAAGTATCCAAAATCGAAATCACGATC 111221
| || |||| || | ||||||| ||| || || | ||| |||||||||||
Sbjct 193027 ATAAATAGGATCTT-TCCAAAGTCTTGAAACCGAAATAATTATAATTAAAATCACGATC 193084
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588973820788800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |