Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017-
04-24] 296 sequences; 15,098,268 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq46 203 4e-47
seq217 111 2e-19
>seq46
Length=215403
Score = 203 bits (224), Expect = 4e-47
Identities = 824/1291 (64%), Gaps = 17/1291 (1%)
Strand=Plus/Plus
Query 105925 TCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTG 105984
||||||| ||| ||||| | || || |||||||| |||||||||||||||||||||||
Sbjct 191603 TCTTCTCGAATAAATGTTTGAAGTATATGGTTCAAAACATTCATTATTACCCAAGATTTG 191662
Query 105985 TGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTT 106044
| || || || |||||||| || || | ||||||| || | | ||| | ||
Sbjct 191663 GGAAGTAGAAGCAGTTGGCATAGGAGCAACCAAAAGAGAATTTCTTAAACCATGTTTGGC 191722
Query 106045 GATGCGTTCCTTGAGAACATCCCAGTCG--TAGTTGAGCTTGGTTTCACCTTCCCACATA 106102
|| || || | |||||| || || || || | | |||| | ||| | |
Sbjct 191723 CATATTTTGTTTTAATGTATCCCAATCCCATAATTCAGTTGGCTTTCTATT--CCATAAA 191780
Query 106103 TCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGG 106162
|||||||| | | ||||| || | || ||||| | |||| | || | |||||
Sbjct 191781 TCAAATTGTAATAATCCTTGCGAAGCTGGGGAACCTTGGTATGTTTGGTATGCACCTTCT 191840
Query 106163 GCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGA 106222
||| ||| |||||| | || | | ||| ||||| ||||||||||| || ||
Sbjct 191841 TCTTGAGCTAATTCAATAGAAGTTTCAACAGCTGCATGATAAATGGTTTCAAAAATTTGA 191900
Query 106223 GCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCC 106282
|| | || | ||||| | |||||||||| | | | || || |||
Sbjct 191901 ATGTTTAATTCTCTAGCTTCTTGAGAATCAAATGGTAATCTTAAGGCCATGAAGGAATCG 191960
Query 106283 GCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTC 106342
|| | |||||||||||| ||| |||| ||||| | ||| || || | || ||
Sbjct 191961 GCTAAACCTTGAACACCTAAAGCAATTGGTCTATTCTTCATGTTGGAAGTCTTAGCT-TC 192019
Query 106343 TC-AACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGT 106401
| ||| |||||| | || | ||||||||| |||| ||| ||||||| ||||||
Sbjct 192020 TGGAACTGGATAATAGTTACGATCAATGACTTTATTTAAATTACGAGTAACAACCTTTGT 192079
Query 106402 GATTTCATGAAGTTTTTCATAAT-----CAAAAGTGCGAGTC-TCTTCATTGACATACTT 106455
|| |||||| | |||||| ||| ||| | || || |||| | ||| |
Sbjct 192080 GACTTCATGTAATTTTTCGAAATTATACCAAGAATGATCATCATCTTTTTCAACAAATGA 192139
Query 106456 TGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAA 106515
||| | || ||||| || |||||||||||||| || || | || || |
Sbjct 192140 TGGTAAAGCAATTGAAGCTAAATTGCAAACAGCAACTTCTTCTGGGGAAGAATATTCAAC 192199
Query 106516 AATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTT 106575
|||||| ||| || |||||| |||||| | ||||| |||||||| || ||| |
Sbjct 192200 AATTTCACAACATAAATTGGAAGATTTAATCATACCCAAGTTCTTTTGATTGGATTTTCT 192259
Query 106576 GTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAAT 106635
|| || ||||| || || | ||| | || || || || || || || | | | |||
Sbjct 192260 ATTACAAGCATCTTTATATAACATAAATGGAGTACCAGTTTCAGTTTGAGCTTCTAAAAT 192319
Query 106636 TGCCTTCCACACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTT 106695
| | ||| | | ||| || | | | || ||||| || || ||
Sbjct 192320 GGAATACCATAATTTTTGAGCTTTAACGGTTTGTCTACCACGACCCTCTCTTTCATATTT 192379
Query 106696 TGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGG 106755
| || | ||||| || ||||| | || | | ||||| || | | |||
Sbjct 192380 TTCATATAATTGCTCAAATTCATCACCGTAAACATCTGGTAATCCTGGAGCTTCATTTGG 192439
Query 106756 ACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCA 106815
| |||| | || ||| | ||| | ||||| | ||||||||| | |||||||||||
Sbjct 192440 AGAGAATAAAGTCCAATCACCGTTTTGTTCAACTCTCTTCATGAATAAATCTGGAATCCA 192499
Query 106816 CAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTC 106875
| | || || | |||||| | | ||||| | |||||| || || | ||
Sbjct 192500 TAAAGCTGGGAATAAATCTCTTGCTCTAATTTCTTCTTTACCTTGATTCTTTCTAATATC 192559
Query 106876 AAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CT 106931
|| ||| || | ||||| || |||||||| || | ||| | || | || || ||
Sbjct 192560 AATGAAATCAAAAATATCAGCATGCCATGGTTCTAAATAAAGAGCAAAAGCACCTGGTCT 192619
Query 106932 TTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAA 106991
| | || | |||||| ||||| || || || ||| || || || | ||| ||||
Sbjct 192620 CTTGTTACC-ACCTTGATCAACATAACGAGCAGTATTGTTGAAGACACGGACCATAGGAA 192678
Query 106992 TAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCAT 107051
| ||||| | || |||||| || || |||| || | |||| | | | ||
Sbjct 192679 TGATACCGTTGGAAGTACCATTAGTACCAGCAATATAAGCACCAGTGGCACGAATGTTAT 192738
Query 107052 GGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTC 107111
| || || | |||||||| ||||| | |||||||||| ||||| | | | |||
Sbjct 192739 GAATATGTAAACCAATACCACCAGCACTCTTTGAGATTAAAGCACAAGTCTTTAAAGTAT 192798
Query 107112 CATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCG 107171
|||| ||||| | || || || ||||| | || | | ||| ||| ||||| || |
Sbjct 192799 CATAAATACCATCAATAGAATCTTCCTTCATTGCAACTAAGAAACAAGAAGACATTTGTG 192858
Query 107172 GTCTTGGTGTACCAGCATTGAAGAGGGTTGG 107202
| |||| ||||||||||| || | |||||
Sbjct 192859 GGTTTGGAGTACCAGCATTAAATAAAGTTGG 192889
>seq217
Length=263222
Score = 111 bits (122), Expect = 2e-19
Identities = 120/159 (75%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 155044 TATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCG 155103
|||||||||||||| || || || || | ||||| |||||||||||| ||||||
Sbjct 144244 TATGGTCGTGTTGCTCCTCGTTCTGGATTAGCTGTTAAGCATGGTATTTCTACTGGTGCT 144303
Query 155104 GGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGAC 155163
|||||||||||| | || |||| ||||||||| || || ||| | || ||||| |||
Sbjct 144304 GGTGTTATTGATGCTGATTATAGAGGTGAAGTTAAGGTTGTTTTATTTAATCATTCAGAT 144363
Query 155164 AAAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAA 155202
|| || ||||| || ||| || ||| | || ||||||
Sbjct 144364 AAGGATTTTGAAGTTAAGGCTGGTGATAGAATTGCACAA 144402
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589978617071040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |