Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017-
04-24] 296 sequences; 15,098,268 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq267 129 7e-25
>seq267
Length=67190
Score = 129 bits (142), Expect = 7e-25
Identities = 196/279 (70%), Gaps = 0/279 (0%)
Strand=Plus/Minus
Query 158421 TGACATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCA 158480
||| ||||| |||||| || ||||| |||||| |||| | || || || ||||| ||
Sbjct 56504 TGATATTGCCTTAGGTACTACTCAAAGATTTGGTGTTCCATTTGGTTATGGTGGTCCACA 56445
Query 158481 TGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGG 158540
|||||||| |||||||| | || || ||||| || ||||| |||||||| ||
Sbjct 56444 TGCTGCATATTTTGCAACTAGTATGAAATACTCTAGAAAAATTCCTGGTAGAATTGTTGG 56385
Query 158541 TCAGTCAGTAGATAGCGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCA 158600
| || |||||| |||||| ||| |||||||| |||| |||||||| ||
Sbjct 56384 TGTTTCCAAAGATAGATTAGGTAAGCCAGCCCTTAGATTAGCTTTACAAACTAGAGAACA 56325
Query 158601 GCATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAA 158660
||||| | | || || || ||||||||||| || || || ||||| | | |||||
Sbjct 56324 ACATATTAAGCGTGAAAAGGCTACCAGTAACATTTGTACTGCTCAAGCTTTATTAGCTAA 56265
Query 158661 TATGTCTGGGTTCTATGCAGCATATCATGGTGCAGATGG 158699
|| |||| ||||| | ||||||||| | || ||
Sbjct 56264 CATTTCTGCTAATTATGCCGTCTATCATGGTCCTGAAGG 56226
Score = 111 bits (122), Expect = 2e-19
Identities = 186/262 (71%), Gaps = 8/262 (3%)
Strand=Plus/Minus
Query 159547 ATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCA-GACAGATATG 159605
|||||||| || ||||| ||||| ||||| |||| ||| || ||| | || |||
Sbjct 55357 ATTATGATCACTTATCCGTCTACTTATGGTTTATTCGAACCAGGTGTCAAGGAAGCTAT- 55299
Query 159606 TAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACA 159665
| | || || || ||||| ||| || || ||||||||||| || | ||||||||
Sbjct 55298 TGATATCGTCCACACCAATGGAGGTTTAGTCTACCTTGATGGTGCTAACATGAATGCACA 55239
Query 159666 GGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAA 159725
|| ||| || | ||| |||| | ||||| ||||| |||||||| ||| | |||||
Sbjct 55238 AGTTGGTTTAACTTCTCCAGGTGATTTAGGTGCCGATGTTTGTCATCTTAACATTCATAA 55179
Query 159726 GACATTCTGTATT-CCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCAA 159784
||| || || ||| | ||||| ||||| ||||| || || ||| | |||| |||
Sbjct 55178 GAC-TTTTGCATTATCTCATGGTGGTGGTGGTCCAGGTCAAGCTCCAGTCTGTGT--CAA 55122
Query 159785 --AACATCTCACACCATTTGTA 159804
||||||| | ||||||| ||
Sbjct 55121 GGAACATCTTAAACCATTTTTA 55100
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588049024210560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |