Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017- 04-24] 296 sequences; 15,098,268 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq267 129 7e-25 >seq267 Length=67190 Score = 129 bits (142), Expect = 7e-25 Identities = 196/279 (70%), Gaps = 0/279 (0%) Strand=Plus/Minus Query 158421 TGACATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCA 158480 ||| ||||| |||||| || ||||| |||||| |||| | || || || ||||| || Sbjct 56504 TGATATTGCCTTAGGTACTACTCAAAGATTTGGTGTTCCATTTGGTTATGGTGGTCCACA 56445 Query 158481 TGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGG 158540 |||||||| |||||||| | || || ||||| || ||||| |||||||| || Sbjct 56444 TGCTGCATATTTTGCAACTAGTATGAAATACTCTAGAAAAATTCCTGGTAGAATTGTTGG 56385 Query 158541 TCAGTCAGTAGATAGCGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCA 158600 | || |||||| |||||| ||| |||||||| |||| |||||||| || Sbjct 56384 TGTTTCCAAAGATAGATTAGGTAAGCCAGCCCTTAGATTAGCTTTACAAACTAGAGAACA 56325 Query 158601 GCATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAA 158660 ||||| | | || || || ||||||||||| || || || ||||| | | ||||| Sbjct 56324 ACATATTAAGCGTGAAAAGGCTACCAGTAACATTTGTACTGCTCAAGCTTTATTAGCTAA 56265 Query 158661 TATGTCTGGGTTCTATGCAGCATATCATGGTGCAGATGG 158699 || |||| ||||| | ||||||||| | || || Sbjct 56264 CATTTCTGCTAATTATGCCGTCTATCATGGTCCTGAAGG 56226 Score = 111 bits (122), Expect = 2e-19 Identities = 186/262 (71%), Gaps = 8/262 (3%) Strand=Plus/Minus Query 159547 ATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCA-GACAGATATG 159605 |||||||| || ||||| ||||| ||||| |||| ||| || ||| | || ||| Sbjct 55357 ATTATGATCACTTATCCGTCTACTTATGGTTTATTCGAACCAGGTGTCAAGGAAGCTAT- 55299 Query 159606 TAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACA 159665 | | || || || ||||| ||| || || ||||||||||| || | |||||||| Sbjct 55298 TGATATCGTCCACACCAATGGAGGTTTAGTCTACCTTGATGGTGCTAACATGAATGCACA 55239 Query 159666 GGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAA 159725 || ||| || | ||| |||| | ||||| ||||| |||||||| ||| | ||||| Sbjct 55238 AGTTGGTTTAACTTCTCCAGGTGATTTAGGTGCCGATGTTTGTCATCTTAACATTCATAA 55179 Query 159726 GACATTCTGTATT-CCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCAA 159784 ||| || || ||| | ||||| ||||| ||||| || || ||| | |||| ||| Sbjct 55178 GAC-TTTTGCATTATCTCATGGTGGTGGTGGTCCAGGTCAAGCTCCAGTCTGTGT--CAA 55122 Query 159785 --AACATCTCACACCATTTGTA 159804 ||||||| | ||||||| || Sbjct 55121 GGAACATCTTAAACCATTTTTA 55100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588049024210560