Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017- 04-24] 296 sequences; 15,098,268 total letters Query= NC_015290.1 Length=182180 Score E Sequences producing significant alignments: (Bits) Value seq268 95.1 1e-14 >seq268 Length=66830 Score = 95.1 bits (104), Expect = 1e-14 Identities = 178/257 (69%), Gaps = 15/257 (6%) Strand=Plus/Minus Query 150977 CACCAGAAATTCTTGATGGAAGAGTAAAGACTTTACATCCAAAGATTCATGGTGGTATTC 151036 |||| ||||| | | ||| ||||| |||||||||||||| |||||||||||||| Sbjct 6862 CACCTGAAATGTTAGGTGGTAGAGTCAAGACTTTACATCCTGCTGTTCATGGTGGTATTT 6803 Query 151037 TTGC-ACAACGAGGTA-ATTCTAGT---CATGATTTAG-ATCTTAAGGTAAATCGTATTG 151090 | || | || | || | ||| | || ||||||| ||| ||| | |||| Sbjct 6802 TGGCTAGAA--ATTTACAATCTGATGAACAAGATTTAGCTTCTCAAG-------GAATTG 6752 Query 151091 AACCGATTGATATTGTTGCTGTAAACCTATATCCATTTAAAGAAACTGTTGCTAAACCAG 151150 || | ||||| ||||| | || |||||||||| ||||||||| || ||||| | Sbjct 6751 AAAAGGTTGATTATGTTGTTTGTAATTTATATCCATTCAAAGAAACTATTTCTAAAGTTG 6692 Query 151151 GTGTAACTCTTGCAGAAGCAATTGAGAATATTGACATTGGTGGTCCTAGTATGGTAAGAT 151210 || ||| ||| ||||||| |||| | ||||| ||||||||| | | | | ||| Sbjct 6691 CCGTTACTGTTGAAGAAGCAGTTGAAGAAATTGATATTGGTGGTGTCACTCTTTTGAGAG 6632 Query 151211 CAGCAGCAAAGAATTAT 151227 | || || |||||| || Sbjct 6631 CTGCTGCTAAGAATCAT 6615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582845843462400