Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017-
04-24] 296 sequences; 15,098,268 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq253 163 6e-35
seq254 150 4e-31
>seq253
Length=293773
Score = 163 bits (180), Expect = 6e-35
Identities = 170/223 (76%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | ||| ||||| | || | ||| || || ||||| || ||||| || | | |||
Sbjct 106537 TCTCAATCTTAAAACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCAGATAAAGT 106596
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| |||||||| | || ||||| |||||||| | |||||||| || || || || ||
Sbjct 106597 TCTACCATCTTCTAATTGTTTACCAGCGAAGATTAAACGTTGTTGATCAGGTGGGATACC 106656
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| || ||||||||||| |||||||| ||||||||||| ||| ||| ||||| |
Sbjct 106657 TTCCTTATCTTGAATTTTAGATTTGACGTTATCAATGGTGTCAGAAGATTCAACTTCTAA 106716
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141
||||| ||||| || || |||||||| ||||| | |||||||
Sbjct 106717 GGTAATAGTCTTACCGGTTAAAGTTTTAACGAAGATTTGCATT 106759
Score = 149 bits (164), Expect = 1e-30
Identities = 166/222 (75%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | |||||| || | ||| | || || || ||||| || ||||| || | | |||
Sbjct 106081 TCTTAATCTCAAGACTAAGTGCAATGTAGATTCCTTTTGGATGTTGTAGTCAGATAAAGT 106140
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| |||||||| | || ||||| |||||||| | ||||||||||| || ||||| ||
Sbjct 106141 TCTACCATCTTCTAATTGTTTACCAGCGAAGATTAAACGTTGTTGGTCAGGTGGAATACC 106200
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| || ||||||||||| || ||||| ||||| ||||| ||| ||| ||||| |
Sbjct 106201 TTCCTTATCTTGAATTTTAGATTTAACGTTATCAATAGTGTCAGAAGATTCAACTTCTAA 106260
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|||| ||||| || || || || || ||||| | ||||||
Sbjct 106261 AGTAATGGTCTTACCAGTTAAGGTCTTAACGAAGATTTGCAT 106302
Score = 140 bits (154), Expect = 7e-28
Identities = 164/222 (74%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | ||| ||||| | || | ||| || || ||||| || ||||| || | | |||
Sbjct 106309 TCTCAATCTTAAAACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCAGATAAAGT 106368
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| |||||||| | || ||||| |||||||| | |||||||| || || || || ||
Sbjct 106369 TCTACCATCTTCTAATTGTTTACCAGCGAAGATTAAACGTTGTTGATCAGGTGGGATACC 106428
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| || ||||||||||| || ||||| ||||| ||||| ||| ||| ||||| |
Sbjct 106429 TTCCTTATCTTGAATTTTAGATTTAACGTTATCAATAGTGTCAGAAGATTCAACTTCTAA 106488
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|||| ||||| || || || || || ||||| | ||||||
Sbjct 106489 AGTAATGGTCTTACCAGTTAAGGTCTTAACGAAGATTTGCAT 106530
>seq254
Length=76587
Score = 150 bits (166), Expect = 4e-31
Identities = 170/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | ||| || || | ||| | ||| || || ||||| || ||||| || | | |||
Sbjct 42919 TCTTAATCTTAAGACCAAGTGTAAAGTAGATTCCTTTTGGATGTTGTAGTCAGATAAAGT 42978
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| |||||||| | |||||||| || ||||| | || |||||| || || ||||| ||
Sbjct 42979 TCTACCATCTTCTAATTGCTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGAATACC 43038
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| || ||||| || || ||||| || ||||||||||| ||| ||| ||||| |
Sbjct 43039 TTCCTTATCTTGGATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCTAA 43098
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTTATGG 195146
||||| ||||| || || || || || ||||| | |||||||| |||
Sbjct 43099 GGTAATGGTCTTACCAGTTAAGGTCTTGACGAAAATTTGCATTTTTGG 43146
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109477392291032
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |