Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017-
04-24] 296 sequences; 15,098,268 total letters
Query= NC_015780.1
Length=205791
Score E
Sequences producing significant alignments: (Bits) Value
seq124 109 7e-19
seq276 96.9 5e-15
>seq124
Length=181928
Score = 109 bits (120), Expect = 7e-19
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 126978 AAACATATGGTTAAAGATAAAATGCATGCTAGAAGTCATGGTCAAGTAACAACATTACAT 127037
|||||||||||| ||||| |||||||| ||| |||| | | || ||| |
Sbjct 174197 AAACATATGGTTTTGGATAAGATGCATGCAAGAGCAAGAGGTCCAAGAGCAGTCTTAACT 174138
Query 127038 CGTCAACCAAACTGTGGTCGTTCCCAAGGTGGTGGATTAAGATTTGGAGAAATGGAAAAA 127097
| ||||||| | ||| | || || |||||| |||||||| ||||||||||||| |
Sbjct 174137 AGACAACCAACCGAAGGTAGATCAAGAGATGGTGGGTTAAGATTGGGAGAAATGGAAAGA 174078
Query 127098 GATTGTATTTTGGTTCATGGAGCCACACAATTTTTAAATGAAAGAATGTTTTTATGTTCA 127157
|||||| || | | | |||| || ||||||| || |||||| | | | |||||
Sbjct 174077 GATTGTGTTATTGCTTATGGTGCTTCACAATTGTTGTTGGAAAGATTAATGATCAGTTCA 174018
Query 127158 GATCCTTTTCAAATTGATGTGTGTACAAATTGTGG 127192
||| ||||| || ||||||| |||| || |||||
Sbjct 174017 GATGCTTTTGAAGTTGATGTATGTAATAAATGTGG 173983
>seq276
Length=61907
Score = 96.9 bits (106), Expect = 5e-15
Identities = 140/191 (73%), Gaps = 5/191 (3%)
Strand=Plus/Minus
Query 104903 AACTTGTTAAATGAAATTGGTGTTAAAGTATGGAATGATAATGGTTCACGTAAGTTTTTA 104962
||||| || | ||| | || || ||| | ||| | | ||| || |||||| | | |||
Sbjct 8935 AACTT-TTGAGTGACAAAGGCGTGAAAATTTGGGAAGGTAACGGATCACGTGAATATTTG 8877
Query 104963 GATTCTTGTGGATTTCACTT-TCGAAAAGAAGGTGATTTAGGACCAATTTATGGATTTCA 105021
||| | ||||| ||| ||| |||||||||||||| || ||||||| || ||
Sbjct 8876 GATAAATTAGGATTG-ACTCATCGTCGTGAAGGTGATTTAGGTCCGGTTTATGGTTTCCA 8818
Query 105022 ATGGAGACATGCTGGAGCTCAATATATCGACTGTGATACCGACTATACCGGCCAAGG-TA 105080
|||||||||| ||| ||| ||||| | || |||||| | || |||||||| ||||| ||
Sbjct 8817 ATGGAGACATTTTGGTGCTGAATATGTGGATTGTGATGCTGATTATACCGGTCAAGGATA 8758
Query 105081 TAGACCAATTA 105091
| || ||||||
Sbjct 8757 T-GATCAATTA 8748
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658400763908160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |