Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017- 04-24] 296 sequences; 15,098,268 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq124 109 7e-19 seq276 96.9 5e-15 >seq124 Length=181928 Score = 109 bits (120), Expect = 7e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 126978 AAACATATGGTTAAAGATAAAATGCATGCTAGAAGTCATGGTCAAGTAACAACATTACAT 127037 |||||||||||| ||||| |||||||| ||| |||| | | || ||| | Sbjct 174197 AAACATATGGTTTTGGATAAGATGCATGCAAGAGCAAGAGGTCCAAGAGCAGTCTTAACT 174138 Query 127038 CGTCAACCAAACTGTGGTCGTTCCCAAGGTGGTGGATTAAGATTTGGAGAAATGGAAAAA 127097 | ||||||| | ||| | || || |||||| |||||||| ||||||||||||| | Sbjct 174137 AGACAACCAACCGAAGGTAGATCAAGAGATGGTGGGTTAAGATTGGGAGAAATGGAAAGA 174078 Query 127098 GATTGTATTTTGGTTCATGGAGCCACACAATTTTTAAATGAAAGAATGTTTTTATGTTCA 127157 |||||| || | | | |||| || ||||||| || |||||| | | | ||||| Sbjct 174077 GATTGTGTTATTGCTTATGGTGCTTCACAATTGTTGTTGGAAAGATTAATGATCAGTTCA 174018 Query 127158 GATCCTTTTCAAATTGATGTGTGTACAAATTGTGG 127192 ||| ||||| || ||||||| |||| || ||||| Sbjct 174017 GATGCTTTTGAAGTTGATGTATGTAATAAATGTGG 173983 >seq276 Length=61907 Score = 96.9 bits (106), Expect = 5e-15 Identities = 140/191 (73%), Gaps = 5/191 (3%) Strand=Plus/Minus Query 104903 AACTTGTTAAATGAAATTGGTGTTAAAGTATGGAATGATAATGGTTCACGTAAGTTTTTA 104962 ||||| || | ||| | || || ||| | ||| | | ||| || |||||| | | ||| Sbjct 8935 AACTT-TTGAGTGACAAAGGCGTGAAAATTTGGGAAGGTAACGGATCACGTGAATATTTG 8877 Query 104963 GATTCTTGTGGATTTCACTT-TCGAAAAGAAGGTGATTTAGGACCAATTTATGGATTTCA 105021 ||| | ||||| ||| ||| |||||||||||||| || ||||||| || || Sbjct 8876 GATAAATTAGGATTG-ACTCATCGTCGTGAAGGTGATTTAGGTCCGGTTTATGGTTTCCA 8818 Query 105022 ATGGAGACATGCTGGAGCTCAATATATCGACTGTGATACCGACTATACCGGCCAAGG-TA 105080 |||||||||| ||| ||| ||||| | || |||||| | || |||||||| ||||| || Sbjct 8817 ATGGAGACATTTTGGTGCTGAATATGTGGATTGTGATGCTGATTATACCGGTCAAGGATA 8758 Query 105081 TAGACCAATTA 105091 | || |||||| Sbjct 8757 T-GATCAATTA 8748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658400763908160