Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017- 04-24] 296 sequences; 15,098,268 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq46 266 4e-66 >seq46 Length=215403 Score = 266 bits (294), Expect = 4e-66 Identities = 563/836 (67%), Gaps = 17/836 (2%) Strand=Plus/Plus Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTC 36931 |||||| || |||||||| || ||||| ||||||| || || ||||| || | Sbjct 149126 CATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCGAAGAAGTTGGTCTTACCAGC 149185 Query 36932 TAGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATA------TAGTACT 36985 || ||| || |||||||| |||||||||||||||| ||| || | || ||| Sbjct 149186 TAATGAAATGTTTTCCATGAAATCAAATGGATTAGTGACATTGTAAACCTTCTTATTACC 149245 Query 36986 ACATGATAATTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTC 37045 | ||| || | | || | |||| ||||||||||| | ||||| |||||||| | Sbjct 149246 AAATGCTACTA-----ATAATC-TATCAGCAACAAATTCAACGTATTGACACATTAACTT 149299 Query 37046 ATAGTTTATACCAATTAGTTTTACTGGAATTGCATCT-TGAAGAAATAGTTTTTCTATTA 37104 | |||| ||||| | | | || || | ||||| ||||||| | |||| | || Sbjct 149300 ACAGTTCATACCTAACAAACTAACAGGTAAGGCATCAGTGAAGAATTCCTTTT-CAATAG 149358 Query 37105 TTACAGCATCTTTAACTATATTAACAATAACTTCTTCAGTTGGGGGATATTTTAAATATT 37164 ||||| || || || || |||||| |||| ||| ||| || || |||| Sbjct 149359 CAACAGCCTCAACAATAATCTTTTCAATAATTTCTGCAGCTGGTCTATTTTCCAAATGGG 149418 Query 37165 TAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAG 37224 || |||||||| ||||||||| |||||||||||||||||||| || ||||| || | Sbjct 149419 AGAATAATAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAGATTAATTCGTTGG 149478 Query 37225 AAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATC 37284 | || ||||| || |||||||||||||| || || | |||||| || | ||| || || | Sbjct 149479 AGAATGTTAAACCAGGCATTAAACCTCTCTTCTTTAACCAAAAGATGGATGCGAATGAAC 149538 Query 37285 CAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAAC 37344 || ||||||||||||||||| || || ||||| || | | | | | || | Sbjct 149539 CACTGAAGAAAATACCTTCAACAGCAGCGAATGCAACTAATCTTTCAGCAAATAAGGCTT 149598 Query 37345 TATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTT 37404 || || | |||||| | | ||| || ||||| | ||| |||| ||| | Sbjct 149599 CATCGTCTGTGATCCATCTAAGAGCCCAGTCAGCCTTCTTTCTAATACATGGAATATGGT 149658 Query 37405 CAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTA 37464 |||| || || || | | ||| ||| | ||| | |||||||| || |||| | Sbjct 149659 CAATAGCATTGAACAAATAGTCGGCTTCCTTTGGATCCTTGATATAAGTGTCGATTAAAA 149718 Query 37465 AACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAG 37524 ||| ||||||| ||||| ||||| || || || |||||||| || || | | Sbjct 149719 GGGAATAAGTTTCAGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAAGGACTTGG 149778 Query 37525 CTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCAT 37584 |||| | | |||||| || | || | | | | || ||||||||||| || |||| Sbjct 149779 CTTCTGGAATTTGAACTTCAGCTGAGAAGTTTTCAACCAAATTTTCATTAACGATACCAT 149838 Query 37585 CACTAGCTGCAAAGAAAGCAAGAA---CATATTTTATAAAATGTCTTTCATCATTTGATA 37641 | ||| |||||||| ||||| | | | | | ||| || || |||||| || Sbjct 149839 CTGAAGCAGCAAAGAACGCAAGGATTCTAGAAATGAAGAAACGTTCGTCGTCATTTAATT 149898 Query 37642 ATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAA 37697 ||| ||||||| || | |||||| |||||| | ||| || | ||||| ||| Sbjct 149899 TATTTCTCCAATCGTTTAAATCTTTACTTAAATCGATTTCTTCGGCAGTCCAGAAA 149954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592314608427840