Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017- 04-24] 296 sequences; 15,098,268 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq264 87.8 4e-12 >seq264 Length=284827 Score = 87.8 bits (96), Expect = 4e-12 Identities = 169/245 (69%), Gaps = 7/245 (3%) Strand=Plus/Plus Query 150402 TTGGTGAACCAGGTGTTGGTAAAACACAAATCGTTGACGGATTAGCACAACGCATCGCTA 150461 ||||||| ||||||||||||||||| ||| || || || | |||||| | || | Sbjct 62002 TTGGTGACGCAGGTGTTGGTAAAACATCAATTGTCGAAGGCGTTGCACAAAGAATTATTG 62061 Query 150462 ATGGTGATGTTCCAGATTCTATGAAAGATGTTGAAATTCTTT--CTTTGAATATGGGTGC 150519 | |||||||||||| | | || | | | ||| ||| | ||| || ||||||| Sbjct 62062 ACGGTGATGTTCCAAACATTTTG-GCCAACTCCAGATTGTTTGCCCTTG-ATTTGGGTGC 62119 Query 150520 ATTTACTGCTGGTACTAAGTATCGTGGTGAATTCGAAGAACGTGTAGACAATTTGCTACA 150579 || || |||||| ||||||| ||||||||||||||| | || | | | || | Sbjct 62120 TTTGACAGCTGGTGCTAAGTACAAAGGTGAATTCGAAGAAAGAGTTAAGGGTGTTTTAAA 62179 Query 150580 AGAACTAAAAGAACGCGATGA---TGTTATTCTGTTCATCGATGAAATCCATACTATTAT 150636 || | || || | |||| | ||||||| || || ||||||||||||| | || Sbjct 62180 TGATATTGAAAAATCCAATGAGTTTATTATTCTTTTTATTGATGAAATCCATATGTTGAT 62239 Query 150637 GGGTG 150641 ||||| Sbjct 62240 GGGTG 62244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147586047763408