Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017- 04-24] 296 sequences; 15,098,268 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq267 129 7e-25 >seq267 Length=67190 Score = 129 bits (142), Expect = 7e-25 Identities = 196/279 (70%), Gaps = 0/279 (0%) Strand=Plus/Plus Query 139263 CCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCT 139322 || || | ||||||||| | ||||| |||| || || || | | ||||| || Sbjct 56226 CCTTCAGGACCATGATAGACGGCATAATTAGCAGAAATGTTAGCTAATAAAGCTTGAGCA 56285 Query 139323 GTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCT 139382 || || ||||||||||| || || || | ||||||| || ||||||||||||| ||| Sbjct 56286 GTACAAATGTTACTGGTAGCCTTTTCACGCTTAATATGTTGTTCTCTAGTTTGTAAAGCT 56345 Query 139383 AATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTATC 139442 ||||| || || || ||| || || || ||| |||||||| ||||| || Sbjct 56346 AATCTAAGGGCTGGCTTACCTAATCTATCTTTGGAAACACCAACAATTCTACCAGGAATT 56405 Query 139443 TTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCATA 139502 ||||| || || | |||||||| |||||||||| ||||| || || || | Sbjct 56406 TTTCTAGAGTATTTCATACTAGTTGCAAAATATGCAGCATGTGGACCACCATAACCAAAT 56465 Query 139503 GGAATACCAAACCTTTGCATACTACCTACAGCAATATCA 139541 |||| |||||| ||||| || |||||| ||||||||| Sbjct 56466 GGAACACCAAATCTTTGAGTAGTACCTAAGGCAATATCA 56504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578996257705920