Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017-
04-24] 296 sequences; 15,098,268 total letters
Query= NC_021901.1
Length=197693
Score E
Sequences producing significant alignments: (Bits) Value
seq276 145 1e-29
seq217 86.0 8e-12
seq124 82.4 1e-10
>seq276
Length=61907
Score = 145 bits (160), Expect = 1e-29
Identities = 246/354 (69%), Gaps = 2/354 (1%)
Strand=Plus/Minus
Query 172401 GAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTGTT 172460
||||| || ||| |||| |||||||||||| |||||| || | ||| | ||| ||
Sbjct 8972 GAACTCTTGTGGTTTATAGCTGGTTCAACTGATGCAAAACTTTTGAGTGACAAAGGCGTG 8913
Query 172461 AAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAAGA 172520
||| ||||| | | ||| || || ||||||| ||| ||| || || || ||| | |
Sbjct 8912 AAAATTTGGGAAGGTAACGGATCACGTGAATATTTGGATAAATTAGGATTGACTCATCGT 8853
Query 172521 AAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAATAT 172580
|||||||||||||| || ||||||| || |||||||||||| || ||| |||||
Sbjct 8852 CGTGAAGGTGATTTAGGTCCGGTTTATGGTTTCCAATGGAGACATTTTGGTGCTGAATAT 8793
Query 172581 ATCGACTGTGATACAGATTACACAGGACAAGGAGTGGACCAATTAAGTCAAACTATTAAT 172640
| || |||||| | ||||| || || |||||| || |||||| | ||| ||
Sbjct 8792 GTGGATTGTGATGCTGATTATACCGGTCAAGGATATGATCAATTACAAGATGTTATAAAG 8733
Query 172641 ACTTTACAAAACAACCCAGAAAGTAGAAGGATGTTAATTGATAGTTGGAATGTACCTCAA 172700
| ||| | | || ||| | |||||| || | || | |||||| |||| |
Sbjct 8732 AAATTAAAGACGAATCCATATGATAGAAGAATTATCATGTCTGCTTGGAACCCACCTGAT 8673
Query 172701 CTTGATAAAATGGTTCTTCCTCCTTGCCAT-ACTTTAGCACAATTTTATGTCAG 172753
||| |||||||| || || || || ||| |||| | ||||||||||| ||
Sbjct 8672 TTTGCTAAAATGGCACTCCCACCATGTCATGTCTTTTG-TCAATTTTATGTTAG 8620
>seq217
Length=263222
Score = 86.0 bits (94), Expect = 8e-12
Identities = 175/252 (69%), Gaps = 6/252 (2%)
Strand=Plus/Plus
Query 194539 GGGTCTGAAACAATGTATTGCGGGTTTACTGGTaaaaaaaTTGAAAATAAAATTTTTATA 194598
|||| |||| |||||| || ||||||||| ||| || | | || |||| |
Sbjct 89957 GGGTTTGAAGTCATGTATAATGGTCATACTGGTAAGAAA-TTAATGGCACAAGTTTTCTT 90015
Query 194599 GGG-CCAACTTATTACCATCGTCTTAAACACATGGTTAAGGATAAAATGCATGCTAGAAG 194657
|| ||||||||||| || | | | ||||||||| | ||||| || |||||||| ||
Sbjct 90016 TGGACCAACTTATTATCAAAGATTGAGACACATGGTCGATGATAAGATCCATGCTAG-AG 90074
Query 194658 TCA-TGGGCAAGTAACTACTTTACA-TCGACAACCAAATTGTGGTCGTTCTCAAGGTGGA 194715
|| || | ||| | | ||| | | |||||||| | ||| | ||| || |||
Sbjct 90075 CCAGAGGTCCAGT-TCAAGTTTTGACTAGACAACCAGTTGAAGGTAGATCTAGAGATGGT 90133
Query 194716 GGTTTAAGATTTGGAGAAATGGAAAAAGACTGTATTTTAGTCCATGGTGCTACTCAATTC 194775
|||||| | || || |||||||||| ||| ||||| | | ||||||||| | |||
Sbjct 90134 GGTTTACGTTTCGGTGAAATGGAAAGAGATTGTATGATTGCCCATGGTGCGGCAGGTTTC 90193
Query 194776 TTAAATGAAAGA 194787
||||| ||||||
Sbjct 90194 TTAAAGGAAAGA 90205
>seq124
Length=181928
Score = 82.4 bits (90), Expect = 1e-10
Identities = 151/218 (69%), Gaps = 4/218 (2%)
Strand=Plus/Minus
Query 194623 AAACACATGGTTAAGGATAAAATGCATGCTAGAAGTCATGGG--CAAGTAACTACTTTAC 194680
||||| |||||| |||||| |||||||| ||| | | || |||| ||| ||
Sbjct 174197 AAACATATGGTTTTGGATAAGATGCATGCAAGA-GCAAGAGGTCCAAGAGCAGTCTTAAC 174139
Query 194681 ATCGACAACCAAATTGTGGTCGTTCTCAAGGTGGAGGTTTAAGATTTGGAGAAATGGAAA 194740
| ||||||||| ||| | || || ||| || |||||||| |||||||||||||
Sbjct 174138 -TAGACAACCAACCGAAGGTAGATCAAGAGATGGTGGGTTAAGATTGGGAGAAATGGAAA 174080
Query 194741 AAGACTGTATTTTAGTCCATGGTGCTACTCAATTCTTAAATGAAAGAATGTTTTTGTATT 194800
||| ||| || | | |||||||| | ||||| || |||||| | | | ||
Sbjct 174079 GAGATTGTGTTATTGCTTATGGTGCTTCACAATTGTTGTTGGAAAGATTAATGATCAGTT 174020
Query 194801 CTGATCCTTTTCAAGTCGATGTTTGCACAGAATGTGGT 194838
| ||| ||||| |||| ||||| || | ||||||||
Sbjct 174019 CAGATGCTTTTGAAGTTGATGTATGTAATAAATGTGGT 173982
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 632487259788480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |