Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017-
04-24] 296 sequences; 15,098,268 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq253 120 2e-22
seq254 116 3e-21
>seq253
Length=293773
Score = 120 bits (132), Expect = 2e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | | |||||||| | || ||||| ||||| ||||| || || |
Sbjct 106304 CCACCTCTCAATCTTAAAACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCAGAT 106363
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | | ||| || | |||||| ||||| | || || | ||| ||||| || ||
Sbjct 106364 AAAGTTCTACCATCTTCTAATTGTTTACCAGCGAAGATTAAACGTTGTTGATCAGGTGGG 106423
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTT-TCTACAGTGTCAGAAAGTTCTAC 29738
||||| || || ||||| |||||| | || | ||| || | |||||||||| ||| ||
Sbjct 106424 ATACCTTCCTTATCTTG-AATTTTAGATTTAACGTTATCAATAGTGTCAGAAGATTCAAC 106482
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||| | ||| || || || ||||||||||| ||||| || || |||||
Sbjct 106483 TTCTAAAGTAATGGTCTTACCAGTTAAGGTCTTAACGAAGATTTGCAT 106530
Score = 114 bits (126), Expect = 1e-20
Identities = 166/232 (72%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 29556 TTGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATC 29615
||| || || || || | || || || || | || ||||| ||||| ||||| || ||
Sbjct 106072 TTGACCACCTCTTAATCTCAAGACTAAGTGCAATGTAGATTCCTTTTGGATGTTGTAGTC 106131
Query 29616 CGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGG 29675
| | || | | ||| || | |||||| ||||| | || || | ||| || || ||
Sbjct 106132 AGATAAAGTTCTACCATCTTCTAATTGTTTACCAGCGAAGATTAAACGTTGTTGGTCAGG 106191
Query 29676 CGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTT-TCTACAGTGTCAGAAAGTT 29734
|||||||| || || ||||| |||||| | || | ||| || | |||||||||| ||
Sbjct 106192 TGGAATACCTTCCTTATCTTG-AATTTTAGATTTAACGTTATCAATAGTGTCAGAAGATT 106250
Query 29735 CTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| ||||| | ||| || || || ||||||||||| ||||| || || |||||
Sbjct 106251 CAACTTCTAAAGTAATGGTCTTACCAGTTAAGGTCTTAACGAAGATTTGCAT 106302
>seq254
Length=76587
Score = 116 bits (128), Expect = 3e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637
||||| || | || ||||| ||||| ||||| || || | | || | | ||| ||
Sbjct 42932 ACCAAGTGTAAAGTAGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCATCTTCT 42991
Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697
| ||| || |||||| | || |||||||| ||||| || |||||||| || || |||||
Sbjct 42992 AATTGCTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCCTTATCTTGG 43051
Query 29698 AATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTG 29757
| || ||||||| | || | ||||| ||| ||| ||||| | || || || ||
Sbjct 43052 ATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCTAAGGTAATGGTCTTA 43111
Query 29758 CCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
||||||||||| || || || || ||||||||
Sbjct 43112 CCAGTTAAGGTCTTGACGAAAATTTGCATTTT 43143
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385217810321736
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |