Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017- 04-24] 296 sequences; 15,098,268 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq276 104 3e-17 seq124 104 3e-17 >seq276 Length=61907 Score = 104 bits (114), Expect = 3e-17 Identities = 229/337 (68%), Gaps = 10/337 (3%) Strand=Plus/Minus Query 180449 GGTTTAACAAATTCTAATTTGTTAAATGATATTGGTGTTAAAGTGTGGAATGATAATGGT 180508 |||| ||| || | || | || | ||| | || || ||| | ||| | | ||| || Sbjct 8951 GGTTCAACTGATGCAAAACTTTTGAGTGACAAAGGCGTGAAAATTTGGGAAGGTAACGGA 8892 Query 180509 TCGCGTAAGTTTTTAGATTCTTGTGGATT---TCATTTTCGAAAAGAAGGTGATTTAGGA 180565 || ||| | | ||| ||| | ||||| |||| ||| |||||||||||||| Sbjct 8891 TCACGTGAATATTTGGATAAATTAGGATTGACTCATCGTCGT---GAAGGTGATTTAGGT 8835 Query 180566 CCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATATATTGACTGTGATACCAAC 180625 || ||||||| || |||||||||||| || ||| ||||| | || |||||| | | Sbjct 8834 CCGGTTTATGGTTTCCAATGGAGACATTTTGGTGCTGAATATGTGGATTGTGATGCTGAT 8775 Query 180626 TATATCGGGCAAGG-TATAGACCAATTAAGCCAAGTTATAGAAACTATAAAAAATAATCC 180684 |||| ||| ||||| ||| || |||||| | |||||| | | |||| | ||||| Sbjct 8774 TATACCGGTCAAGGATAT-GATCAATTACAAGATGTTATAAAGAAATTAAAGACGAATCC 8716 Query 180685 CGAATGCCGAAGAATAATCATAGATAGTTGGAATGTATCACAATTACCAGATATGGCTCT 180744 | ||||||| ||||| | |||||| | | | || | | ||||| || Sbjct 8715 ATATGATAGAAGAATTATCATGTCTGCTTGGAACCCACCTGATTTTGCTAAAATGGCACT 8656 Query 180745 TCCACCATGTCA-CTGTTTGGTACAATTTTATGTTAG 180780 ||||||||||| | ||| || |||||||||||||| Sbjct 8655 CCCACCATGTCATGTCTTTTGT-CAATTTTATGTTAG 8620 >seq124 Length=181928 Score = 104 bits (114), Expect = 3e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 201954 AAACATATGGTTAAGGATAAAATGCATGCGAGAAGTCATGGTCAAGTAACAACATTACAT 202013 |||||||||||| |||||| |||||||| ||| |||| | | || ||| | Sbjct 174197 AAACATATGGTTTTGGATAAGATGCATGCAAGAGCAAGAGGTCCAAGAGCAGTCTTAACT 174138 Query 202014 CGTCAACCAAACTGTGGTCGGTCCCAAGGTGGTGGATTAAGATTTGGAGAAATGGAAAAA 202073 | ||||||| | ||| | || || |||||| |||||||| ||||||||||||| | Sbjct 174137 AGACAACCAACCGAAGGTAGATCAAGAGATGGTGGGTTAAGATTGGGAGAAATGGAAAGA 174078 Query 202074 GATTGTATTTTGGTTCATGGGGCCACACAATTTTTAAATGAAAGAATGTTTTTGTATTCA 202133 |||||| || | | | |||| || ||||||| || |||||| | | | |||| Sbjct 174077 GATTGTGTTATTGCTTATGGTGCTTCACAATTGTTGTTGGAAAGATTAATGATCAGTTCA 174018 Query 202134 GATCCTTTTCAAATCGATGTGTGTACAAATTGTGG 202168 ||| ||||| || | ||||| |||| || ||||| Sbjct 174017 GATGCTTTTGAAGTTGATGTATGTAATAAATGTGG 173983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655277575464000