Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017-
04-24] 296 sequences; 15,098,268 total letters
Query= NC_023613.1
Length=204815
Score E
Sequences producing significant alignments: (Bits) Value
seq276 104 3e-17
seq124 104 3e-17
>seq276
Length=61907
Score = 104 bits (114), Expect = 3e-17
Identities = 229/337 (68%), Gaps = 10/337 (3%)
Strand=Plus/Minus
Query 180449 GGTTTAACAAATTCTAATTTGTTAAATGATATTGGTGTTAAAGTGTGGAATGATAATGGT 180508
|||| ||| || | || | || | ||| | || || ||| | ||| | | ||| ||
Sbjct 8951 GGTTCAACTGATGCAAAACTTTTGAGTGACAAAGGCGTGAAAATTTGGGAAGGTAACGGA 8892
Query 180509 TCGCGTAAGTTTTTAGATTCTTGTGGATT---TCATTTTCGAAAAGAAGGTGATTTAGGA 180565
|| ||| | | ||| ||| | ||||| |||| ||| ||||||||||||||
Sbjct 8891 TCACGTGAATATTTGGATAAATTAGGATTGACTCATCGTCGT---GAAGGTGATTTAGGT 8835
Query 180566 CCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATATATTGACTGTGATACCAAC 180625
|| ||||||| || |||||||||||| || ||| ||||| | || |||||| | |
Sbjct 8834 CCGGTTTATGGTTTCCAATGGAGACATTTTGGTGCTGAATATGTGGATTGTGATGCTGAT 8775
Query 180626 TATATCGGGCAAGG-TATAGACCAATTAAGCCAAGTTATAGAAACTATAAAAAATAATCC 180684
|||| ||| ||||| ||| || |||||| | |||||| | | |||| | |||||
Sbjct 8774 TATACCGGTCAAGGATAT-GATCAATTACAAGATGTTATAAAGAAATTAAAGACGAATCC 8716
Query 180685 CGAATGCCGAAGAATAATCATAGATAGTTGGAATGTATCACAATTACCAGATATGGCTCT 180744
| ||||||| ||||| | |||||| | | | || | | ||||| ||
Sbjct 8715 ATATGATAGAAGAATTATCATGTCTGCTTGGAACCCACCTGATTTTGCTAAAATGGCACT 8656
Query 180745 TCCACCATGTCA-CTGTTTGGTACAATTTTATGTTAG 180780
||||||||||| | ||| || ||||||||||||||
Sbjct 8655 CCCACCATGTCATGTCTTTTGT-CAATTTTATGTTAG 8620
>seq124
Length=181928
Score = 104 bits (114), Expect = 3e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 201954 AAACATATGGTTAAGGATAAAATGCATGCGAGAAGTCATGGTCAAGTAACAACATTACAT 202013
|||||||||||| |||||| |||||||| ||| |||| | | || ||| |
Sbjct 174197 AAACATATGGTTTTGGATAAGATGCATGCAAGAGCAAGAGGTCCAAGAGCAGTCTTAACT 174138
Query 202014 CGTCAACCAAACTGTGGTCGGTCCCAAGGTGGTGGATTAAGATTTGGAGAAATGGAAAAA 202073
| ||||||| | ||| | || || |||||| |||||||| ||||||||||||| |
Sbjct 174137 AGACAACCAACCGAAGGTAGATCAAGAGATGGTGGGTTAAGATTGGGAGAAATGGAAAGA 174078
Query 202074 GATTGTATTTTGGTTCATGGGGCCACACAATTTTTAAATGAAAGAATGTTTTTGTATTCA 202133
|||||| || | | | |||| || ||||||| || |||||| | | | ||||
Sbjct 174077 GATTGTGTTATTGCTTATGGTGCTTCACAATTGTTGTTGGAAAGATTAATGATCAGTTCA 174018
Query 202134 GATCCTTTTCAAATCGATGTGTGTACAAATTGTGG 202168
||| ||||| || | ||||| |||| || |||||
Sbjct 174017 GATGCTTTTGAAGTTGATGTATGTAATAAATGTGG 173983
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 655277575464000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |