Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017- 04-24] 296 sequences; 15,098,268 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq254 91.5 3e-13 >seq254 Length=76587 Score = 91.5 bits (100), Expect = 3e-13 Identities = 100/135 (74%), Gaps = 11/135 (8%) Strand=Plus/Plus Query 81646 AGTAAATTCCTTCTGTATATTATAATCAGATAGAGTTCTACAGTCTTCTAA--------- 81696 |||| ||||||| || || || || ||||||| |||||||| |||||||| Sbjct 42943 AGTAGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCATCTTCTAATTGCTTACC 43002 Query 81697 --CAAAGATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAATCTTTGCTTT 81754 ||||||||| |||||||||| | || | || ||||||||||||| ||||| | ||| Sbjct 43003 AGCAAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCCTTATCTTGGATCTTGGATTT 43062 Query 81755 TATATTTTCAATCGT 81769 | ||| ||||| || Sbjct 43063 GACATTGTCAATGGT 43077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903407857378560