Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017- 04-24] 296 sequences; 15,098,268 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq253 107 2e-18 >seq253 Length=293773 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || || ||||| |||||||| || | || || | ||||| ||| | Sbjct 106758 ATGCAAATCTTCGTTAAAACTTTAACCGGTAAGACTATTACCTTAGAAGTTGAATCTTCT 106699 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || || || | || ||| |||||| ||||| || ||||| || || ||||| Sbjct 106698 GACACCATTGATAACGTCAAATCTAAAATTCAAGATAAGGAAGGTATCCCACCTGATCAA 106639 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||| | | || | || || |||||| | ||||||| ||||| | | || ||||| Sbjct 106638 CAACGTTTAATCTTCGCTGGTAAACAATTAGAAGATGGTAGAACTTTATCTGACTACAAC 106579 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 || ||||| ||||| || | ||||| || |||||||||||||| || Sbjct 106578 ATCCAAAAGGAATCTACTTTACATTTGGTTTTAAGATTGAGAGGTGG 106532 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || || || || ||||| || || | || || | ||||| ||| | Sbjct 106530 ATGCAAATCTTCGTTAAGACCTTAACTGGTAAGACCATTACTTTAGAAGTTGAATCTTCT 106471 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || ||||| || | || ||| |||||| ||||| || ||||| || || ||||| Sbjct 106470 GACACTATTGATAACGTTAAATCTAAAATTCAAGATAAGGAAGGTATCCCACCTGATCAA 106411 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||| | | || | || || |||||| | ||||||| ||||| | | || ||||| Sbjct 106410 CAACGTTTAATCTTCGCTGGTAAACAATTAGAAGATGGTAGAACTTTATCTGACTACAAC 106351 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 || ||||| ||||| || | ||||| || |||||||||||||| || Sbjct 106350 ATCCAAAAGGAATCTACTTTACATTTGGTTTTAAGATTGAGAGGTGG 106304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445092753150720