Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017-
04-24] 296 sequences; 15,098,268 total letters
Query= NC_026430.1
Length=125767
Score E
Sequences producing significant alignments: (Bits) Value
seq254 114 1e-20
seq253 107 2e-18
>seq254
Length=76587
Score = 114 bits (126), Expect = 1e-20
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 106256 AAAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACC 106315
||||||||||||||| || || || || ||||| |||||||||||| | ||| ||| |
Sbjct 43144 AAAAATGCAAATTTTCGTCAAGACCTTAACTGGTAAGACCATTACCTTAGAAGTCGAATC 43085
Query 106316 CGGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGA 106375
||| | ||| | | || ||| || || || || ||||| | || |||
Sbjct 43084 TTCCGACACCATTGACAATGTCAAATCCAAGATCCAAGATAAGGAAGGTATTCCACCTGA 43025
Query 106376 TCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTA 106435
||||||||| | || | ||| || || |||||||||||| || |||| | || ||
Sbjct 43024 TCAACAAAGATTAATCTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTA 42965
Query 106436 CAACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486
|||||| ||||| |||||||| |||| || || || || ||| |||| ||
Sbjct 42964 CAACATCCAAAAGGAATCTACTTTACACTTGGTCTTAAGATTAAGAGGTGG 42914
>seq253
Length=293773
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319
|||||||| || ||||| || || ||||| ||||||||||| | ||| ||| |
Sbjct 106302 ATGCAAATCTTCGTTAAGACCTTAACTGGTAAGACCATTACTTTAGAAGTTGAATCTTCT 106243
Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379
|| || ||| | || ||| |||||| || || ||||| | || ||| |||
Sbjct 106242 GACACTATTGATAACGTTAAATCTAAAATTCAAGATAAGGAAGGTATTCCACCTGACCAA 106183
Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439
||| | | || | || || ||||||||||||||| || |||| | || ||||||
Sbjct 106182 CAACGTTTAATCTTCGCTGGTAAACAATTAGAAGATGGTAGAACTTTATCTGACTACAAC 106123
Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486
|| ||||| ||||||||| | || ||||| ||||| ||| |||| ||
Sbjct 106122 ATCCAAAAGGAATCTACATTGCACTTAGTCTTGAGATTAAGAGGTGG 106076
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319
|||||||| || ||||| || || ||||| ||||||||||| | ||| ||| |
Sbjct 106530 ATGCAAATCTTCGTTAAGACCTTAACTGGTAAGACCATTACTTTAGAAGTTGAATCTTCT 106471
Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379
|| || ||| | || ||| |||||| || || ||||| | || |||||||
Sbjct 106470 GACACTATTGATAACGTTAAATCTAAAATTCAAGATAAGGAAGGTATCCCACCTGATCAA 106411
Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439
||| | | || | || || ||||||||||||||| || |||| | || ||||||
Sbjct 106410 CAACGTTTAATCTTCGCTGGTAAACAATTAGAAGATGGTAGAACTTTATCTGACTACAAC 106351
Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486
|| ||||| |||||||| ||||||| || || || || |||| ||
Sbjct 106350 ATCCAAAAGGAATCTACTTTACATTTGGTTTTAAGATTGAGAGGTGG 106304
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318
||||||||| || |||||||| || || || ||||| |||||| | ||| ||| |
Sbjct 106759 AATGCAAATCTTCGTTAAAACTTTAACCGGTAAGACTATTACCTTAGAAGTTGAATCTTC 106700
Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378
|| | ||| | || ||| |||||| || || ||||| | || ||||||
Sbjct 106699 TGACACCATTGATAACGTCAAATCTAAAATTCAAGATAAGGAAGGTATCCCACCTGATCA 106640
Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438
|||| | | || | || || ||||||||||||||| || |||| | || |||||
Sbjct 106639 ACAACGTTTAATCTTCGCTGGTAAACAATTAGAAGATGGTAGAACTTTATCTGACTACAA 106580
Query 106439 CATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486
||| ||||| |||||||| ||||||| || || || || |||| ||
Sbjct 106579 CATCCAAAAGGAATCTACTTTACATTTGGTTTTAAGATTGAGAGGTGG 106532
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 402328148595968
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |