Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017-
04-24] 296 sequences; 15,098,268 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq46 206 3e-48
seq217 111 2e-19
>seq46
Length=215403
Score = 206 bits (228), Expect = 3e-48
Identities = 825/1291 (64%), Gaps = 17/1291 (1%)
Strand=Plus/Plus
Query 110698 TCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTG 110757
||||||| || ||||||| || ||||||||||| |||||||||||||||||||||||
Sbjct 191603 TCTTCTCGAATAAATGTTTGAAGTATATGGTTCAAAACATTCATTATTACCCAAGATTTG 191662
Query 110758 TGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTT 110817
| || || || |||||||| || || | ||||||| || | | ||| | |
Sbjct 191663 GGAAGTAGAAGCAGTTGGCATAGGAGCAACCAAAAGAGAATTTCTTAAACCATGTTTGGC 191722
Query 110818 GATGCGTTCCTTGAGAACATCCCAGTCG--TAGTTGAGCTTGGTTTCACCTTCCCACATG 110875
|| || || | |||||| || || || || | | |||| | ||| |
Sbjct 191723 CATATTTTGTTTTAATGTATCCCAATCCCATAATTCAGTTGGCTTTCTATT--CCATAAA 191780
Query 110876 TCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGG 110935
||||| || | | ||||| || || || ||||| | | |||| || | |||||
Sbjct 191781 TCAAATTGTAATAATCCTTGCGAAGCTGGGGAACCTTGGTATGTTTGGTATGCACCTTCT 191840
Query 110936 GCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGA 110995
||| ||| |||||| | || | | ||| ||||| ||||||||||| || ||
Sbjct 191841 TCTTGAGCTAATTCAATAGAAGTTTCAACAGCTGCATGATAAATGGTTTCAAAAATTTGA 191900
Query 110996 GCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCC 111055
|| | || | ||||| | |||||||||| | | | || || |||
Sbjct 191901 ATGTTTAATTCTCTAGCTTCTTGAGAATCAAATGGTAATCTTAAGGCCATGAAGGAATCG 191960
Query 111056 GCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTC 111115
|| | |||||||||||| ||| |||| ||||| | ||| || || | || ||
Sbjct 191961 GCTAAACCTTGAACACCTAAAGCAATTGGTCTATTCTTCATGTTGGAAGTCTTAGCT-TC 192019
Query 111116 TC-AACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGT 111174
| ||| |||||| | || | ||||||||| |||| ||| ||||||| ||||||
Sbjct 192020 TGGAACTGGATAATAGTTACGATCAATGACTTTATTTAAATTACGAGTAACAACCTTTGT 192079
Query 111175 GATTTCATGAAGTTTTTCATAAT-----CAAAAGTGCGAGTC-TCTTCATTGACATACTT 111228
|| |||||| | |||||| ||| ||| | || || |||| | ||| |
Sbjct 192080 GACTTCATGTAATTTTTCGAAATTATACCAAGAATGATCATCATCTTTTTCAACAAATGA 192139
Query 111229 TGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAA 111288
||| | || ||||| || |||||||||||||| || || | || || |
Sbjct 192140 TGGTAAAGCAATTGAAGCTAAATTGCAAACAGCAACTTCTTCTGGGGAAGAATATTCAAC 192199
Query 111289 AATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTT 111348
|||||| |||||| |||||| |||||| | ||||| |||||||| || || |
Sbjct 192200 AATTTCACAACATAAATTGGAAGATTTAATCATACCCAAGTTCTTTTGATTGGATTTTCT 192259
Query 111349 GTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAAT 111408
|| || ||||| || || | ||| | || || || || || || || | || | |||
Sbjct 192260 ATTACAAGCATCTTTATATAACATAAATGGAGTACCAGTTTCAGTTTGAGCTTCTAAAAT 192319
Query 111409 AGCCTTCCAAACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTT 111468
| | ||| | | ||| || | | | || ||||| || || ||
Sbjct 192320 GGAATACCATAATTTTTGAGCTTTAACGGTTTGTCTACCACGACCCTCTCTTTCATATTT 192379
Query 111469 TGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGG 111528
| || | ||||| || ||||| | || | | ||||| || | | |||
Sbjct 192380 TTCATATAATTGCTCAAATTCATCACCGTAAACATCTGGTAATCCTGGAGCTTCATTTGG 192439
Query 111529 ACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCA 111588
| |||| | || ||| | ||| || ||||| | ||||||||| | |||||||||||
Sbjct 192440 AGAGAATAAAGTCCAATCACCGTTTTGTTCAACTCTCTTCATGAATAAATCTGGAATCCA 192499
Query 111589 CAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTC 111648
| | || || | |||||| | | ||||| | |||||| || || | ||
Sbjct 192500 TAAAGCTGGGAATAAATCTCTTGCTCTAATTTCTTCTTTACCTTGATTCTTTCTAATATC 192559
Query 111649 AAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CT 111704
|| ||| || | ||||| || |||||||| || | ||| | || | || || ||
Sbjct 192560 AATGAAATCAAAAATATCAGCATGCCATGGTTCTAAATAAAGAGCAAAAGCACCTGGTCT 192619
Query 111705 TTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAA 111764
| | || | |||||| ||||| || || || ||| || || || | ||| ||||
Sbjct 192620 CTTGTTACC-ACCTTGATCAACATAACGAGCAGTATTGTTGAAGACACGGACCATAGGAA 192678
Query 111765 TAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCAT 111824
| ||||| | || |||||| || || |||| || | |||| | | | ||
Sbjct 192679 TGATACCGTTGGAAGTACCATTAGTACCAGCAATATAAGCACCAGTGGCACGAATGTTAT 192738
Query 111825 GGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTC 111884
| || || | |||||||| ||||| | |||||||||| ||||| | | | |||
Sbjct 192739 GAATATGTAAACCAATACCACCAGCACTCTTTGAGATTAAAGCACAAGTCTTTAAAGTAT 192798
Query 111885 CATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCG 111944
|||| ||||| | || || || ||||| | || | | ||| ||| ||||| || |
Sbjct 192799 CATAAATACCATCAATAGAATCTTCCTTCATTGCAACTAAGAAACAAGAAGACATTTGTG 192858
Query 111945 GTCTTGGTGTACCAGCATTGAAGAGGGTTGG 111975
| |||| ||||||||||| || | |||||
Sbjct 192859 GGTTTGGAGTACCAGCATTAAATAAAGTTGG 192889
>seq217
Length=263222
Score = 111 bits (122), Expect = 2e-19
Identities = 120/159 (75%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 164604 TATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCG 164663
|||||||||||||| || || || || | ||||| |||||||||||| ||||||
Sbjct 144244 TATGGTCGTGTTGCTCCTCGTTCTGGATTAGCTGTTAAGCATGGTATTTCTACTGGTGCT 144303
Query 164664 GGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGAC 164723
|||||||||||| | || |||| ||||||||| || || ||| | || ||||| |||
Sbjct 144304 GGTGTTATTGATGCTGATTATAGAGGTGAAGTTAAGGTTGTTTTATTTAATCATTCAGAT 144363
Query 164724 AAAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAA 164762
|| || ||||| || ||| || ||| | || ||||||
Sbjct 144364 AAGGATTTTGAAGTTAAGGCTGGTGATAGAATTGCACAA 144402
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628029676281600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |