Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017-
04-24] 296 sequences; 15,098,268 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq46 203 4e-47
>seq46
Length=215403
Score = 203 bits (224), Expect = 4e-47
Identities = 831/1295 (64%), Gaps = 25/1295 (2%)
Strand=Plus/Minus
Query 104330 CCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCC 104389
||||| | || ||||||||||| |||| || |||||||| ||| ||| | | ||
Sbjct 192889 CCAACTTTATTTAATGCTGGTACTCCAAACCCACAAATGTCTTCTTGTTTCTTAGTTGCA 192830
Query 104390 AACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCA 104449
| ||||| || || || | ||||| |||| ||| | | | ||||| |||||||
Sbjct 192829 ATGAAGGAAGATTCTATTGATGGTATTTATGATACTTTAAAGACTTGTGCTTTAATCTCA 192770
Query 104450 AAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATT 104509
||| | ||||| |||||||| | || || ||| | | | |||| | || ||||
Sbjct 192769 AAGAGTGCTGGTGGTATTGGTTTACATATTCATAACATTCGTGCCACTGGTGCTTATATT 192710
Query 104510 CGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACA 104569
|| || |||||| || | ||||| ||||| ||| | || || || ||| ||
Sbjct 192709 GCTGGTACTAATGGTACTTCCAACGGTATCATTCCTATGGTCCGTGTCTTCAACAATACT 192650
Query 104570 GCGCGCTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGA 104625
|| || ||||| |||||| | || | | || || || | || | ||| | ||
Sbjct 192649 GCTCGTTATGTTGATCAAGGT-GGTAACAAGAGACCAGGTGCTTTTGCTCTTTATTTAGA 192591
Query 104626 GCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGA 104685
|||||||| || ||||| | || ||| |||| | | || |||||| | || ||
Sbjct 192590 ACCATGGCATGCTGATATTTTTGATTTCATTGATATTAGAAAGAATCAAGGTAAAGAAGA 192531
Query 104686 GGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGT 104745
| | ||| | ||| | ||| | |||||||||||| | ||||||||||||||
Sbjct 192530 AATTAGAGCAAGAGATTTATTCCCAGCTTTATGGATTCCAGATTTATTCATGAAGAGAGT 192471
Query 104746 TGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGC 104805
||| | | || ||||| || | || | |||| | | || || || | | ||||
Sbjct 192470 TGAACAAAACGGTGATTGGACTTTATTCTCTCCAAATGAAGCTCCAGGATTACCAGATGT 192411
Query 104806 CGTGGGTGAGGAGTTTGAAGCCCTT-TACACAAAGTACGAGGAAGAAGGTCGGGCGACTG 104864
||||| || |||| ||| || || ||| || || ||| ||||| | |
Sbjct 192410 TTACGGTGATGAATTTG-AGCAATTATATGAAAAATATGAAAGAGAGGGTCGTGGTAGAC 192352
Query 104865 CGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTA 104924
|| || |||| | | ||| | | ||| | | ||||||| || |||||||
Sbjct 192351 AAACCGTTAAAGCTCAAAAATTATGGTATTCCATTTTAGAAGCTCAAACTGAAACTGGTA 192292
Query 104925 CACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTG 104984
| |||| ||| | || ||||| || ||||| ||| ||||||||||| ||||||
Sbjct 192291 CTCCATTTATGTTATATAAAGATGCTTGTAATAGAAAATCCAATCAAAAGAACTTGGGTA 192232
Query 104985 TGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGG 105044
|||| || ||||||| | ||| ||||| | |||| | | | ||| || |
Sbjct 192231 TGATTAAATCTTCCAATTTATGTTGTGAAATTGTTGAATATTCTTCCCCAGAAGAAGTTG 192172
Query 105045 CTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGA-CA 105103
|||| || || | || ||||| ||| | || | ||| || | ||| | || ||
Sbjct 192171 CTGTTTGCAATTTAGCTTCAATTGCTTTACCATCATTTGTTGA--AAAAGATGATGATCA 192114
Query 105104 TT-------TGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAA 105156
|| | ||| |||||| | || ||||| || || ||| || || ||||
Sbjct 192113 TTCTTGGTATAATTTCGAAAAATTACATGAAGTCACAAAGGTTGTTACTCGTAATTTAAA 192054
Query 105157 CAGAGTTATTGATAGAAATTTTTACCCCGTT-GAGACTGCTCGTAAATCTAATATGAGAC 105215
| ||| |||||| | || | ||| || ||| ||| ||| | || || ||||
Sbjct 192053 TAAAGTCATTGATCGTAACTATTATCCAGTTCCAGA-AGCTAAGACTTCCAACATGAAGA 191995
Query 105216 ACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT-TCTTTGTCGCCAC 105274
| | ||||||| | | |||||||| ||| | || ||| ||||| | || ||
Sbjct 191994 ATAGACCAATTGCTTTAGGTGTTCAAGGTTTAGCCGATTCCTTCATGGCCTTAAGATTAC 191935
Query 105275 GCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCAC 105334
|||||||||| | ||||| | ||| | || | || ||||| ||||| |||||
Sbjct 191934 -CATTTGATTCTCAAGAAGCTAGAGAATTAAACATTCAAATTTTTGAAACCATTTATCAT 191876
Query 105335 GCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAG 105394
|| ||| |||| | | || || || | | || ||| |||| |||| | |
Sbjct 191875 GCAGCTGTTGAAACTTCTATTGAATTAGCTCAAGAAGAAGGTGCATACCAAACATACCAA 191816
Query 105395 GGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTT 105454
||||| |||||||| ||||| | | ||||||||| | ||| | | || |||| ||
Sbjct 191815 GGTTCCCCAGCTTCGCAAGGATTATTACAATTTGATTTATGGAATAGAAAG-CCAA-CTG 191758
Query 105455 CACTA--CGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTC 105512
| || || ||||| | | || || || | | ||| | | || ||
Sbjct 191757 AATTATGGGATTGGGATACATTAAAACAAAATATGGCCAAACATGGTTTAAGAAATTCTC 191698
Query 105513 TCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCT 105572
| | | ||||| |||||||| || || || | ||||||||||||||||||||||| |
Sbjct 191697 TTTTGGTTGCTCCTATGCCAACTGCTTCTACTTCCCAAATCTTGGGTAATAATGAATGTT 191638
Query 105573 TTGAACCCTACACGACGAACATCTATCTGAGAAGA 105607
||||||| || || | ||||| ||| |||||||
Sbjct 191637 TTGAACCATATACTTCAAACATTTATTCGAGAAGA 191603
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583258641935040
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