Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017- 04-24] 296 sequences; 15,098,268 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq46 203 4e-47 >seq46 Length=215403 Score = 203 bits (224), Expect = 4e-47 Identities = 831/1295 (64%), Gaps = 25/1295 (2%) Strand=Plus/Minus Query 104330 CCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCC 104389 ||||| | || ||||||||||| |||| || |||||||| ||| ||| | | || Sbjct 192889 CCAACTTTATTTAATGCTGGTACTCCAAACCCACAAATGTCTTCTTGTTTCTTAGTTGCA 192830 Query 104390 AACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCA 104449 | ||||| || || || | ||||| |||| ||| | | | ||||| ||||||| Sbjct 192829 ATGAAGGAAGATTCTATTGATGGTATTTATGATACTTTAAAGACTTGTGCTTTAATCTCA 192770 Query 104450 AAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATT 104509 ||| | ||||| |||||||| | || || ||| | | | |||| | || |||| Sbjct 192769 AAGAGTGCTGGTGGTATTGGTTTACATATTCATAACATTCGTGCCACTGGTGCTTATATT 192710 Query 104510 CGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACA 104569 || || |||||| || | ||||| ||||| ||| | || || || ||| || Sbjct 192709 GCTGGTACTAATGGTACTTCCAACGGTATCATTCCTATGGTCCGTGTCTTCAACAATACT 192650 Query 104570 GCGCGCTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGA 104625 || || ||||| |||||| | || | | || || || | || | ||| | || Sbjct 192649 GCTCGTTATGTTGATCAAGGT-GGTAACAAGAGACCAGGTGCTTTTGCTCTTTATTTAGA 192591 Query 104626 GCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGA 104685 |||||||| || ||||| | || ||| |||| | | || |||||| | || || Sbjct 192590 ACCATGGCATGCTGATATTTTTGATTTCATTGATATTAGAAAGAATCAAGGTAAAGAAGA 192531 Query 104686 GGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGT 104745 | | ||| | ||| | ||| | |||||||||||| | |||||||||||||| Sbjct 192530 AATTAGAGCAAGAGATTTATTCCCAGCTTTATGGATTCCAGATTTATTCATGAAGAGAGT 192471 Query 104746 TGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGC 104805 ||| | | || ||||| || | || | |||| | | || || || | | |||| Sbjct 192470 TGAACAAAACGGTGATTGGACTTTATTCTCTCCAAATGAAGCTCCAGGATTACCAGATGT 192411 Query 104806 CGTGGGTGAGGAGTTTGAAGCCCTT-TACACAAAGTACGAGGAAGAAGGTCGGGCGACTG 104864 ||||| || |||| ||| || || ||| || || ||| ||||| | | Sbjct 192410 TTACGGTGATGAATTTG-AGCAATTATATGAAAAATATGAAAGAGAGGGTCGTGGTAGAC 192352 Query 104865 CGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTA 104924 || || |||| | | ||| | | ||| | | ||||||| || ||||||| Sbjct 192351 AAACCGTTAAAGCTCAAAAATTATGGTATTCCATTTTAGAAGCTCAAACTGAAACTGGTA 192292 Query 104925 CACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTG 104984 | |||| ||| | || ||||| || ||||| ||| ||||||||||| |||||| Sbjct 192291 CTCCATTTATGTTATATAAAGATGCTTGTAATAGAAAATCCAATCAAAAGAACTTGGGTA 192232 Query 104985 TGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGG 105044 |||| || ||||||| | ||| ||||| | |||| | | | ||| || | Sbjct 192231 TGATTAAATCTTCCAATTTATGTTGTGAAATTGTTGAATATTCTTCCCCAGAAGAAGTTG 192172 Query 105045 CTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGA-CA 105103 |||| || || | || ||||| ||| | || | ||| || | ||| | || || Sbjct 192171 CTGTTTGCAATTTAGCTTCAATTGCTTTACCATCATTTGTTGA--AAAAGATGATGATCA 192114 Query 105104 TT-------TGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAA 105156 || | ||| |||||| | || ||||| || || ||| || || |||| Sbjct 192113 TTCTTGGTATAATTTCGAAAAATTACATGAAGTCACAAAGGTTGTTACTCGTAATTTAAA 192054 Query 105157 CAGAGTTATTGATAGAAATTTTTACCCCGTT-GAGACTGCTCGTAAATCTAATATGAGAC 105215 | ||| |||||| | || | ||| || ||| ||| ||| | || || |||| Sbjct 192053 TAAAGTCATTGATCGTAACTATTATCCAGTTCCAGA-AGCTAAGACTTCCAACATGAAGA 191995 Query 105216 ACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT-TCTTTGTCGCCAC 105274 | | ||||||| | | |||||||| ||| | || ||| ||||| | || || Sbjct 191994 ATAGACCAATTGCTTTAGGTGTTCAAGGTTTAGCCGATTCCTTCATGGCCTTAAGATTAC 191935 Query 105275 GCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCAC 105334 |||||||||| | ||||| | ||| | || | || ||||| ||||| ||||| Sbjct 191934 -CATTTGATTCTCAAGAAGCTAGAGAATTAAACATTCAAATTTTTGAAACCATTTATCAT 191876 Query 105335 GCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAG 105394 || ||| |||| | | || || || | | || ||| |||| |||| | | Sbjct 191875 GCAGCTGTTGAAACTTCTATTGAATTAGCTCAAGAAGAAGGTGCATACCAAACATACCAA 191816 Query 105395 GGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTT 105454 ||||| |||||||| ||||| | | ||||||||| | ||| | | || |||| || Sbjct 191815 GGTTCCCCAGCTTCGCAAGGATTATTACAATTTGATTTATGGAATAGAAAG-CCAA-CTG 191758 Query 105455 CACTA--CGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTC 105512 | || || ||||| | | || || || | | ||| | | || || Sbjct 191757 AATTATGGGATTGGGATACATTAAAACAAAATATGGCCAAACATGGTTTAAGAAATTCTC 191698 Query 105513 TCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCT 105572 | | | ||||| |||||||| || || || | ||||||||||||||||||||||| | Sbjct 191697 TTTTGGTTGCTCCTATGCCAACTGCTTCTACTTCCCAAATCTTGGGTAATAATGAATGTT 191638 Query 105573 TTGAACCCTACACGACGAACATCTATCTGAGAAGA 105607 ||||||| || || | ||||| ||| ||||||| Sbjct 191637 TTGAACCATATACTTCAAACATTTATTCGAGAAGA 191603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583258641935040