Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017- 04-24] 296 sequences; 15,098,268 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq46 86.0 7e-12 >seq46 Length=215403 Score = 86.0 bits (94), Expect = 7e-12 Identities = 141/203 (69%), Gaps = 3/203 (1%) Strand=Plus/Plus Query 74751 GCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCA 74810 ||||| || ||| | ||||||||||| | || ||||| || || || | | ||| Sbjct 149433 GCAAAATCAGTATGTAAACCTTCATCTCTACAGATTAATTCGTTGGAGAATGTTAAACCA 149492 Query 74811 GGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATG 74870 ||||| | || | |||||| ||||||||||||| ||| |||||||||||||| || Sbjct 149493 GGCATTAAACCTCTCTTCTTTAACCAAAAGATGGATGCGAATGAACCACTGAAGAAAATA 149552 Query 74871 CCTTCGACACACGCAAAGGCGACAAGGCGTTGCGC---GAACGGTGCATCGGAAGTCATC 74927 ||||| ||| || || || || | | || || || | | ||||| || ||| Sbjct 149553 CCTTCAACAGCAGCGAATGCAACTAATCTTTCAGCAAATAAGGCTTCATCGTCTGTGATC 149612 Query 74928 CAAGTCTGAGCCCATTCAGCTTT 74950 || | ||||||| ||||| || Sbjct 149613 CATCTAAGAGCCCAGTCAGCCTT 149635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547213975300800