Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017-
04-24] 296 sequences; 15,098,268 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq253 172 5e-38
>seq253
Length=293773
Score = 172 bits (190), Expect = 5e-38
Identities = 176/230 (77%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || |||||| | ||||| ||| ||||||| | ||||| ||| | ||
Sbjct 106758 ATGCAAATCTTCGTTAAAACTTTAACCGGTAAGACTATTACCTTAGAAGTTGAATCTTCT 106699
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | |||||| ||||||||||| || ||||| || ||||| ||||||
Sbjct 106698 GACACCATTGATAACGTCAAATCTAAAATTCAAGATAAGGAAGGTATCCCACCTGATCAA 106639
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| |||||||| | ||| || |||||||| ||||| || || | || || ||||||
Sbjct 106638 CAACGTTTAATCTTCGCTGGTAAACAATTAGAAGATGGTAGAACTTTATCTGACTACAAC 106579
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| |||||||| || || |||||||||||||| | ||| | ||||| ||
Sbjct 106578 ATCCAAAAGGAATCTACTTTACATTTGGTTTTAAGATTGAGAGGTGGTAT 106529
Score = 154 bits (170), Expect = 1e-32
Identities = 172/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || || | || || ||| | |||||| | ||||| ||| | ||
Sbjct 106530 ATGCAAATCTTCGTTAAGACCTTAACTGGTAAGACCATTACTTTAGAAGTTGAATCTTCT 106471
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || ||| ||||||||||| || ||||| || ||||| ||||||
Sbjct 106470 GACACTATTGATAACGTTAAATCTAAAATTCAAGATAAGGAAGGTATCCCACCTGATCAA 106411
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| |||||||| | ||| || |||||||| ||||| || || | || || ||||||
Sbjct 106410 CAACGTTTAATCTTCGCTGGTAAACAATTAGAAGATGGTAGAACTTTATCTGACTACAAC 106351
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| |||||||| || || |||||||||||||| | ||| | ||||| ||
Sbjct 106350 ATCCAAAAGGAATCTACTTTACATTTGGTTTTAAGATTGAGAGGTGGTAT 106301
Score = 131 bits (144), Expect = 1e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || || | || || ||| | |||||| | ||||| ||| | ||
Sbjct 106302 ATGCAAATCTTCGTTAAGACCTTAACTGGTAAGACCATTACTTTAGAAGTTGAATCTTCT 106243
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || ||| ||||||||||| || ||||| || ||||| || |||
Sbjct 106242 GACACTATTGATAACGTTAAATCTAAAATTCAAGATAAGGAAGGTATTCCACCTGACCAA 106183
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| |||||||| | ||| || |||||||| ||||| || || | || || ||||||
Sbjct 106182 CAACGTTTAATCTTCGCTGGTAAACAATTAGAAGATGGTAGAACTTTATCTGACTACAAC 106123
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| |||||||| || || || || || || ||| | || | |||||
Sbjct 106122 ATCCAAAAGGAATCTACATTGCACTTAGTCTTGAGATTAAGAGGTGG 106076
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434916790801920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |