Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017-
04-24] 296 sequences; 15,098,268 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq46 324 1e-83
>seq46
Length=215403
Score = 324 bits (358), Expect = 1e-83
Identities = 615/898 (68%), Gaps = 23/898 (3%)
Strand=Plus/Plus
Query 4247 AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAA 4306
||||||| ||||| || || || |||| |||||||||||| || || || || ||||
Sbjct 149129 AACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCTAA 149188
Query 4307 CGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAA----TGTTTTTCACACT 4362
||||| |||||||| |||||||| |||||||| | |||||| | || || ||
Sbjct 149189 TGAAATGTTTTCCATGAAATCAAATGGATTAGTGACATTGTAAACCTTCTTATTACCAAA 149248
Query 4363 TTAGAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGT 4422
| ||||| | |||| ||||| |||||||| | || || | ||| | | ||||
Sbjct 149249 T----GCTACTAATAATCTATCAGCAACAAATTCAACGTATTGACACATTAACTTACAGT 149304
Query 4423 TAATTCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGG 4482
| || || | || || ||||||| || | || || || || | ||| |||| || |
Sbjct 149305 TCATACCTAACAAACTAACAGGTAAGGCATCAGTGAAGAATTCCTTTTCAATAGCAACAG 149364
Query 4483 CTTCTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACA 4542
| || || || | || || | ||| || |||| ||||| | || | || |
Sbjct 149365 CCTCAACAATAATCTTTTCAATAATTTCTGCAGCTGGTCTATTTTCCAAATGGGAGAATA 149424
Query 4543 ATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACG 4602
||||||| ||||||||| ||| |||||||| ||||| | || | |||||| || || |
Sbjct 149425 ATAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAGATTAATTCGTTGGAGAATG 149484
Query 4603 TTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAA 4662
|||| || ||||||||||||||||| || | |||||| || | || ||||| ||| |
Sbjct 149485 TTAAACCAGGCATTAAACCTCTCTTCTTTAACCAAAAGATGGATGCGAATGAACCACTGA 149544
Query 4663 AGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGT 4722
|||| || ||||| || || || || || ||||||| | || || | | ||
Sbjct 149545 AGAAAATACCTTCAACAGCAGCGAATGCAACTAATCTTTCAGCAAATAAGGCTTCATCGT 149604
Query 4723 CTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAG 4782
|| | |||||| | | ||||||| ||| || || ||| || ||||| || ||||
Sbjct 149605 CTGTGATCCATCTAAGAGCCCAGTCAGCCTTCTTTCTAATACATGGAATATGGTCAATAG 149664
Query 4783 CGTT----AAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGG 4838
| || ||||| | ||| || ||| || | ||||||||||| |||| |||
Sbjct 149665 CATTGAACAAATAGTCGGCTTCCTT----TGGATCCTTGATATAAGTGTCGATTAAAAGG 149720
Query 4839 CTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCT 4898
||| |||||||||| || ||||| || || || || || || ||| | | |||
Sbjct 149721 GAATAAGTTTCAGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAAGGACTTGGCT 149780
Query 4899 TCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCA 4958
|||| | ||||||||| | || |||| || || ||||| || || ||||| ||
Sbjct 149781 TCTGGAATTTGAACTTCAGCTGAGAAGTTTTCAACCAAATTTTCATTAACGATACCATCT 149840
Query 4959 CTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGC--TTAAGT- 5015
|| ||||| ||||| | | ||| || ||| | ||||||| | | |||| |
Sbjct 149841 GAAGCAGCAAAGAACGCAAGGATTCTAGAAATGAAGAAACGTTCGTC-GTCATTTAATTT 149899
Query 5016 -TTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGC 5074
||| |||| | | ||||||||| ||||||| | |||||| ||||||| || || ||
Sbjct 149900 ATTTCTCCAATCGTTTAAATCTTTACTTAAATCGATTTCTTCGGCAGTCCAGAAAGAAGC 149959
Query 5075 TTCCGCTTTTTTGTACATAGACCAAATATCA-GGATACTGAATCGGAAGTATGACAAA 5131
||| || |||||||| | |||||| ||| ||| || ||| || | ||||||||
Sbjct 149960 TTCAGCCTTTTTGTAAAATTGCCAAATTTCATGGAATCT-AATTGGGAACATGACAAA 150016
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427048059418568
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |