Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017- 04-24] 296 sequences; 15,098,268 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq46 324 1e-83 >seq46 Length=215403 Score = 324 bits (358), Expect = 1e-83 Identities = 615/898 (68%), Gaps = 23/898 (3%) Strand=Plus/Plus Query 4247 AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAA 4306 ||||||| ||||| || || || |||| |||||||||||| || || || || |||| Sbjct 149129 AACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCTAA 149188 Query 4307 CGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAA----TGTTTTTCACACT 4362 ||||| |||||||| |||||||| |||||||| | |||||| | || || || Sbjct 149189 TGAAATGTTTTCCATGAAATCAAATGGATTAGTGACATTGTAAACCTTCTTATTACCAAA 149248 Query 4363 TTAGAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGT 4422 | ||||| | |||| ||||| |||||||| | || || | ||| | | |||| Sbjct 149249 T----GCTACTAATAATCTATCAGCAACAAATTCAACGTATTGACACATTAACTTACAGT 149304 Query 4423 TAATTCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGG 4482 | || || | || || ||||||| || | || || || || | ||| |||| || | Sbjct 149305 TCATACCTAACAAACTAACAGGTAAGGCATCAGTGAAGAATTCCTTTTCAATAGCAACAG 149364 Query 4483 CTTCTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACA 4542 | || || || | || || | ||| || |||| ||||| | || | || | Sbjct 149365 CCTCAACAATAATCTTTTCAATAATTTCTGCAGCTGGTCTATTTTCCAAATGGGAGAATA 149424 Query 4543 ATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACG 4602 ||||||| ||||||||| ||| |||||||| ||||| | || | |||||| || || | Sbjct 149425 ATAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAGATTAATTCGTTGGAGAATG 149484 Query 4603 TTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAA 4662 |||| || ||||||||||||||||| || | |||||| || | || ||||| ||| | Sbjct 149485 TTAAACCAGGCATTAAACCTCTCTTCTTTAACCAAAAGATGGATGCGAATGAACCACTGA 149544 Query 4663 AGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGT 4722 |||| || ||||| || || || || || ||||||| | || || | | || Sbjct 149545 AGAAAATACCTTCAACAGCAGCGAATGCAACTAATCTTTCAGCAAATAAGGCTTCATCGT 149604 Query 4723 CTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAG 4782 || | |||||| | | ||||||| ||| || || ||| || ||||| || |||| Sbjct 149605 CTGTGATCCATCTAAGAGCCCAGTCAGCCTTCTTTCTAATACATGGAATATGGTCAATAG 149664 Query 4783 CGTT----AAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGG 4838 | || ||||| | ||| || ||| || | ||||||||||| |||| ||| Sbjct 149665 CATTGAACAAATAGTCGGCTTCCTT----TGGATCCTTGATATAAGTGTCGATTAAAAGG 149720 Query 4839 CTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCT 4898 ||| |||||||||| || ||||| || || || || || || ||| | | ||| Sbjct 149721 GAATAAGTTTCAGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAAGGACTTGGCT 149780 Query 4899 TCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCA 4958 |||| | ||||||||| | || |||| || || ||||| || || ||||| || Sbjct 149781 TCTGGAATTTGAACTTCAGCTGAGAAGTTTTCAACCAAATTTTCATTAACGATACCATCT 149840 Query 4959 CTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGC--TTAAGT- 5015 || ||||| ||||| | | ||| || ||| | ||||||| | | |||| | Sbjct 149841 GAAGCAGCAAAGAACGCAAGGATTCTAGAAATGAAGAAACGTTCGTC-GTCATTTAATTT 149899 Query 5016 -TTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGC 5074 ||| |||| | | ||||||||| ||||||| | |||||| ||||||| || || || Sbjct 149900 ATTTCTCCAATCGTTTAAATCTTTACTTAAATCGATTTCTTCGGCAGTCCAGAAAGAAGC 149959 Query 5075 TTCCGCTTTTTTGTACATAGACCAAATATCA-GGATACTGAATCGGAAGTATGACAAA 5131 ||| || |||||||| | |||||| ||| ||| || ||| || | |||||||| Sbjct 149960 TTCAGCCTTTTTGTAAAATTGCCAAATTTCATGGAATCT-AATTGGGAACATGACAAA 150016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427048059418568