Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017-
04-24] 296 sequences; 15,098,268 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq253 132 1e-25
seq254 111 4e-19
>seq253
Length=293773
Score = 132 bits (146), Expect = 1e-25
Identities = 154/208 (74%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960
||| | |||||| || |||||||||||||| || | ||||||||| ||||||||||
Sbjct 106555 ATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCATCTTCTAATTG 106614
Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020
||| || |||||||| | | || || || | | ||| |||||||| |||||||||||
Sbjct 106615 TTTACCAGCGAAGATTAAACGTTGTTGATCAGGTGGGATACCTTCCTTATCTTGAATTTT 106674
Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080
|||||| | || | | |||| ||| || ||||| | |||||||| || || ||
Sbjct 106675 AGATTTGACGTTATCAATGGTGTCAGAAGATTCAACTTCTAAGGTAATAGTCTTACCGGT 106734
Query 152081 GAGAGTCTTCACGAAGACCTGCATTTTA 152108
| ||| || ||||||| |||||| ||
Sbjct 106735 TAAAGTTTTAACGAAGATTTGCATTGTA 106762
Score = 120 bits (132), Expect = 7e-22
Identities = 149/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960
||| | |||||| || |||||||||||||| || | ||||||||| ||||||||||
Sbjct 106327 ATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCATCTTCTAATTG 106386
Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020
||| || |||||||| | | || || || | | ||| |||||||| |||||||||||
Sbjct 106387 TTTACCAGCGAAGATTAAACGTTGTTGATCAGGTGGGATACCTTCCTTATCTTGAATTTT 106446
Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080
||| || | || | |||| ||| || ||||| | |||||| || || || ||
Sbjct 106447 AGATTTAACGTTATCAATAGTGTCAGAAGATTCAACTTCTAAAGTAATGGTCTTACCAGT 106506
Query 152081 GAGAGTCTTCACGAAGACCTGCAT 152104
| ||||| ||||||| |||||
Sbjct 106507 TAAGGTCTTAACGAAGATTTGCAT 106530
Score = 116 bits (128), Expect = 9e-21
Identities = 144/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967
||||| || |||||||||||||| || | ||||||||| |||||||||| ||| ||
Sbjct 106106 GTAGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCATCTTCTAATTGTTTACCA 106165
Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027
|||||||| | | || ||||| | | || |||||||| ||||||||||| |||
Sbjct 106166 GCGAAGATTAAACGTTGTTGGTCAGGTGGAATACCTTCCTTATCTTGAATTTTAGATTTA 106225
Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087
|| | || | |||| ||| || ||||| | |||||| || || || || | |||
Sbjct 106226 ACGTTATCAATAGTGTCAGAAGATTCAACTTCTAAAGTAATGGTCTTACCAGTTAAGGTC 106285
Query 152088 TTCACGAAGACCTGCAT 152104
|| ||||||| |||||
Sbjct 106286 TTAACGAAGATTTGCAT 106302
>seq254
Length=76587
Score = 111 bits (122), Expect = 4e-19
Identities = 152/211 (72%), Gaps = 1/211 (0%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || | |||||| || |||||||||||||| || | ||||||||| ||||||||||
Sbjct 42934 CAAG-TGTAAAGTAGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCATCTTCTA 42992
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
|| || || ||||| | || || || || | | || |||||||| ||||| |
Sbjct 42993 ATTGCTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCCTTATCTTGGA 43052
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || ||||||| | || | | |||| ||| || ||||| | ||||| || || |
Sbjct 43053 TCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCTAAGGTAATGGTCTTAC 43112
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
| || | ||||| ||||| | ||||||||
Sbjct 43113 CAGTTAAGGTCTTGACGAAAATTTGCATTTT 43143
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153816424134616
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |