Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017-
04-24] 296 sequences; 15,098,268 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq46 289 3e-73
>seq46
Length=215403
Score = 289 bits (320), Expect = 3e-73
Identities = 568/834 (68%), Gaps = 13/834 (2%)
Strand=Plus/Plus
Query 23205 CATAACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTC 23264
||||||||| |||||||| || ||| | ||||||| || || |||||||| |
Sbjct 149126 CATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCGAAGAAGTTGGTCTTACCAGC 149185
Query 23265 TAATGATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGA 23324
|||||| || |||||||| |||||||||||||||| ||| || || ||| || |
Sbjct 149186 TAATGAAATGTTTTCCATGAAATCAAATGGATTAGTGACATTGTAAAC--CTTCTTATTA 149243
Query 23325 T--AATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAG 23382
||| | ||| | ||||| || |||||||||| ||||||||||| || | | ||
Sbjct 149244 CCAAATGCTACTAATAATCTATCAGCAACAAATTCAACGTATTGACACATTAACTTACAG 149303
Query 23383 TTTATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACA 23442
|| ||||||| | | || || | |||||| |||||| |||||||| | ||||
Sbjct 149304 TTCATACCTAACAAACTAACAGGTAAGGCATCAGTGAAGAATTCCTTTTCAATAGCAACA 149363
Query 23443 GCATCTTTAATTATTTGAACAATAACTTCTTCACTAGGTGGATATTTTAAATACTTAAAC 23502
|| || ||| || | |||||| |||| || ||| || || |||| ||
Sbjct 149364 GCCTCAACAATAATCTTTTCAATAATTTCTGCAGCTGGTCTATTTTCCAAATGGGAGAAT 149423
Query 23503 AATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAAT 23562
|||||||| ||||||||| ||||| |||||||| |||| || ||||| || || |||
Sbjct 149424 AATAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAGATTAATTCGTTGGAGAAT 149483
Query 23563 GTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAA 23622
||||| || |||||||| |||| || || | |||||| || | || ||||| ||
Sbjct 149484 GTTAAACCAGGCATTAAACCTCTCTTCTTTAACCAAAAGATGGATGCGAATGAACCACTG 149543
Query 23623 AAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAA 23682
||||||||||| |||||||| || || || || | | | | ||||| || | ||
Sbjct 149544 AAGAAAATACCTTCAACAGCAGCGAATGCAACTAATCTTTCAGCAAATAAGGCTTCATCG 149603
Query 23683 TCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATT 23742
|| | |||||| | | ||| | ||||||| | | | ||| ||| |||||
Sbjct 149604 TCTGTGATCCATCTAAGAGCCCAGTCAGCCTTCTTTCTAATACATGGAATATGGTCAATA 149663
Query 23743 GCTTTTAAGAGAAAAGTTTTTTCTTCATT---ATCTGTTATATATGTATCAATTAGTAAA 23799
|| || || | || || | |||| || ||| | ||||| || || |||| |
Sbjct 149664 GCATTGAACA-AATAG--TCGGCTTCCTTTGGATCCTTGATATAAGTGTCGATTAAAAGG 149720
Query 23800 CTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCT 23859
||| ||||||||||||| ||||| || || || || ||||| || | | |||
Sbjct 149721 GAATAAGTTTCAGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAAGGACTTGGCT 149780
Query 23860 TCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCA 23919
|| | | |||||| ||| | || ||| | | |||||||| ||||| ||||||||
Sbjct 149781 TCTGGAATTTGAACTTCAGCTGAGAAGTTTTCAACCAAATTTTCATTAACGATACCATCT 149840
Query 23920 CTAGCAGCAAAGAAAGCAAGAA---CATATTTTATAAAATGTCTTTCATCAGTTGATAAT 23976
|||||||||||| ||||| | | | | | ||| || || ||| || ||
Sbjct 149841 GAAGCAGCAAAGAACGCAAGGATTCTAGAAATGAAGAAACGTTCGTCGTCATTTAATTTA 149900
Query 23977 TTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAA 24030
||| ||||||| || | |||||| |||||| | ||| || | ||||| |||
Sbjct 149901 TTTCTCCAATCGTTTAAATCTTTACTTAAATCGATTTCTTCGGCAGTCCAGAAA 149954
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521486070494400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |