Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017- 04-24] 296 sequences; 15,098,268 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq46 289 3e-73 >seq46 Length=215403 Score = 289 bits (320), Expect = 3e-73 Identities = 568/834 (68%), Gaps = 13/834 (2%) Strand=Plus/Plus Query 23205 CATAACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTC 23264 ||||||||| |||||||| || ||| | ||||||| || || |||||||| | Sbjct 149126 CATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCGAAGAAGTTGGTCTTACCAGC 149185 Query 23265 TAATGATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGA 23324 |||||| || |||||||| |||||||||||||||| ||| || || ||| || | Sbjct 149186 TAATGAAATGTTTTCCATGAAATCAAATGGATTAGTGACATTGTAAAC--CTTCTTATTA 149243 Query 23325 T--AATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAG 23382 ||| | ||| | ||||| || |||||||||| ||||||||||| || | | || Sbjct 149244 CCAAATGCTACTAATAATCTATCAGCAACAAATTCAACGTATTGACACATTAACTTACAG 149303 Query 23383 TTTATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACA 23442 || ||||||| | | || || | |||||| |||||| |||||||| | |||| Sbjct 149304 TTCATACCTAACAAACTAACAGGTAAGGCATCAGTGAAGAATTCCTTTTCAATAGCAACA 149363 Query 23443 GCATCTTTAATTATTTGAACAATAACTTCTTCACTAGGTGGATATTTTAAATACTTAAAC 23502 || || ||| || | |||||| |||| || ||| || || |||| || Sbjct 149364 GCCTCAACAATAATCTTTTCAATAATTTCTGCAGCTGGTCTATTTTCCAAATGGGAGAAT 149423 Query 23503 AATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAAT 23562 |||||||| ||||||||| ||||| |||||||| |||| || ||||| || || ||| Sbjct 149424 AATAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAGATTAATTCGTTGGAGAAT 149483 Query 23563 GTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAA 23622 ||||| || |||||||| |||| || || | |||||| || | || ||||| || Sbjct 149484 GTTAAACCAGGCATTAAACCTCTCTTCTTTAACCAAAAGATGGATGCGAATGAACCACTG 149543 Query 23623 AAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAA 23682 ||||||||||| |||||||| || || || || | | | | ||||| || | || Sbjct 149544 AAGAAAATACCTTCAACAGCAGCGAATGCAACTAATCTTTCAGCAAATAAGGCTTCATCG 149603 Query 23683 TCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATT 23742 || | |||||| | | ||| | ||||||| | | | ||| ||| ||||| Sbjct 149604 TCTGTGATCCATCTAAGAGCCCAGTCAGCCTTCTTTCTAATACATGGAATATGGTCAATA 149663 Query 23743 GCTTTTAAGAGAAAAGTTTTTTCTTCATT---ATCTGTTATATATGTATCAATTAGTAAA 23799 || || || | || || | |||| || ||| | ||||| || || |||| | Sbjct 149664 GCATTGAACA-AATAG--TCGGCTTCCTTTGGATCCTTGATATAAGTGTCGATTAAAAGG 149720 Query 23800 CTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCT 23859 ||| ||||||||||||| ||||| || || || || ||||| || | | ||| Sbjct 149721 GAATAAGTTTCAGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAAGGACTTGGCT 149780 Query 23860 TCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCA 23919 || | | |||||| ||| | || ||| | | |||||||| ||||| |||||||| Sbjct 149781 TCTGGAATTTGAACTTCAGCTGAGAAGTTTTCAACCAAATTTTCATTAACGATACCATCT 149840 Query 23920 CTAGCAGCAAAGAAAGCAAGAA---CATATTTTATAAAATGTCTTTCATCAGTTGATAAT 23976 |||||||||||| ||||| | | | | | ||| || || ||| || || Sbjct 149841 GAAGCAGCAAAGAACGCAAGGATTCTAGAAATGAAGAAACGTTCGTCGTCATTTAATTTA 149900 Query 23977 TTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAA 24030 ||| ||||||| || | |||||| |||||| | ||| || | ||||| ||| Sbjct 149901 TTTCTCCAATCGTTTAAATCTTTACTTAAATCGATTTCTTCGGCAGTCCAGAAA 149954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521486070494400