Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017-
04-24] 296 sequences; 15,098,268 total letters
Query= NC_033423.1
Length=208501
Score E
Sequences producing significant alignments: (Bits) Value
seq276 120 4e-22
seq217 93.3 6e-14
>seq276
Length=61907
Score = 120 bits (132), Expect = 4e-22
Identities = 205/292 (70%), Gaps = 14/292 (5%)
Strand=Plus/Minus
Query 50727 TATCAAAGATCAGCTGATATGGGTTTAGGCGTTCCTTTCAACGTAGCTTCTTACGCTTTA 50786
|||||||||||| ||||||||| | |||||||| || || | ||||| || || |||
Sbjct 8537 TATCAAAGATCATGTGATATGGGACTTGGCGTTCCATTTAATATCGCTTCATATGCATTA 8478
Query 50787 TTAACGTATTTGATCGCTCAAGCCGTCGATATGAAACCGGGAGAATTTATTCATACGTTA 50846
||||| | |||| || || | ||||||||| | || |||||||||||||| |
Sbjct 8477 TTAACCAAGATGATTGCCCATGTAGTCGATATGGATTGTGGTGAATTTATTCATACTATG 8418
Query 50847 GGAGACGCTCATATTTACCTCGATCACGTCGATGCTTTAAAGGAGCAATTGACTCGAACG 50906
|| ||||||||| | || | ||||| | ||||| || ||||| ||||| | || |
Sbjct 8417 GGTGACGCTCATGTGTATTTAGATCATATTGATGCATTGAAGGAACAATTTTCAAGAGCT 8358
Query 50907 GTAAAGCCGGCGCCGATTTTAAT-TTTA---AAGAAAAAATCGATCGAACTAA------- 50955
||| | || | ||||| ||| |||||| || ||| || |||
Sbjct 8357 CCAAAACAATTCCCTAAATTAATGATTAAAGAAGAAAGAAGAGATGAAATTAAATCAATT 8298
Query 50956 GA-GATTTTAAATTTGAAGATTTCG-AATTGTTGGATTACGATCCTCATCCT 51005
|| |||||||| ||||||||||| | |||||||||| || || || | ||||
Sbjct 8297 GATGATTTTAAGTTTGAAGATTTTGAAATTGTTGGA-TATGAACCACTTCCT 8247
Score = 100 bits (110), Expect = 4e-16
Identities = 157/225 (70%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 50473 AAGGAGATTTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGCGCGTTACATAA 50532
|||| |||||||| || ||||| ||||| ||||||||||||||||| || || |
Sbjct 8848 AAGGTGATTTAGGTCCGGTTTATGGTTTCCAATGGAGACATTTTGGTGCTGAATATGTGG 8789
Query 50533 ATTGCGACGTAAATTACGAAGGTCAAGGCGTGGATCAACTGCAAAAAATTATAACGACGT 50592
|||| || | |||| |||||||| |||||| | ||| | |||||| || |
Sbjct 8788 ATTGTGATGCTGATTATACCGGTCAAGGATATGATCAATTACAAGATGTTATAAAGAAAT 8729
Query 50593 TGAAAACAAACCCCGACGATCGGCGTATTTTAATGACCGCCTGGAATCCAACCGATATAG 50652
| || || || || | ||| | | ||| | ||| | || ||||| ||| | ||| | |
Sbjct 8728 TAAAGACGAATCCATATGATAGAAGAATTATCATGTCTGCTTGGAACCCACCTGATTTTG 8669
Query 50653 ATCAAACCGTTTTACCTCCGTGTCATGTTTTATGTCAATTTTATG 50697
| ||| | | || || |||||||| || |||||||||||||
Sbjct 8668 CTAAAATGGCACTCCCACCATGTCATGTCTTTTGTCAATTTTATG 8624
>seq217
Length=263222
Score = 93.3 bits (102), Expect = 6e-14
Identities = 132/183 (72%), Gaps = 2/183 (1%)
Strand=Plus/Plus
Query 63716 TCGTTAAAATAAAATTAAGATCTTCTAAAATACCAGAAATAGGTGATAAATTTGCTTCTT 63775
||||||| | | | | ||| || |||| || || |||| |||||||| ||||| |||
Sbjct 89643 TCGTTAAGGTTAGAATGAGAACTACTAAGATTCCGCAAATTGGTGATAAGTTTGCGTCTA 89702
Query 63776 TTACA-GCTCAAAAAGGTACGTGTGGTATGATTTATCGACAAGAAGATATGCCTTTTACC 63834
||| | |||||| ||||| || | | |||| |||| ||||||||||| || ||
Sbjct 89703 G-ACATGGTCAAAAGGGTACTATCGGGGTTACTTATAGACATGAAGATATGCCGTTCACA 89761
Query 63835 AAAGACGGTATCGTACCCGATCTCGTCATCAATCCACACGCTTTTCCCAGTCGTATGACC 63894
| | ||||| || || ||| | |||| |||||||| ||| |||| |||||||||
Sbjct 89762 GCACAAGGTATTGTTCCTGATTTGATCATTAATCCACATGCTATTCCATCTCGTATGACT 89821
Query 63895 GTT 63897
|||
Sbjct 89822 GTT 89824
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 667072731821760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |