Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20xylofermentans_20[genbank_20GCA_5F002105455.1_202017- 04-24] 296 sequences; 15,098,268 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq254 104 6e-17 >seq254 Length=76587 Score = 104 bits (114), Expect = 6e-17 Identities = 145/203 (71%), Gaps = 3/203 (1%) Strand=Plus/Minus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| |||||||||| || || | || || || || || ||| | || || ||| Sbjct 43143 AAAATGC---AAATTTTCGTCAAGACCTTAACTGGTAAGACCATTACCTTAGAAGTCGAA 43087 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 || |||||||| || || |||||| ||||| || || || ||||| || || || Sbjct 43086 TCTTCCGACACCATTGACAATGTCAAATCCAAGATCCAAGATAAGGAAGGTATTCCACCT 43027 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 || || ||| || | ||||| || || || || | |||||||| || ||| | | || Sbjct 43026 GATCAACAAAGATTAATCTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGAC 42967 Query 178095 TATAACGTCCAAAAAGAATCAAC 178117 || ||| ||||||| ||||| || Sbjct 42966 TACAACATCCAAAAGGAATCTAC 42944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203726634849424