Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016-
03-01] 15 sequences; 16,411,463 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq5 86.0 1e-11
>seq5
Length=1485630
Score = 86.0 bits (94), Expect = 1e-11
Identities = 145/211 (69%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 118847 ATGACCACGGAAATTTTCCGAATCATGGTCATCAAACGTGACCAAAGAATCCAAAACGTC 118906
||||| ||||||||| | || ||| || ||| |||||||| || | | ||
Sbjct 914052 ATGACAACGGAAATTCTTAGATCAATGCTCTAYAAAGGTGACCAACTTATTAGAGAAGTT 913993
Query 118907 AAATGGGTTATTTTTGACGAAGTTCATTATATCAATGATAAATCCAGGGGTTCTGTATGG 118966
||||||||||||||| |||||||| ||||| | |||||| | ||| ||| |||
Sbjct 913992 GGATGGGTTATTTTTGATGAAGTTCACTATATGAGAGATAAAGAACGTGGTGTTGTGTGG 913933
Query 118967 GAAGAGTCAATCATTTTGATGCCGGATACGATGCGCGCTGtttttttGTCTGCAACGGTT 119026
||||| | ||||| ||| | || |||| | || ||| || | |||||||| |
Sbjct 913932 GAAGAAACCATCATCTTGTTACCAGATAATGTTCGATTTGTATTCCTTTCTGCAACTATA 913873
Query 119027 CCGAACGCGGTTGAATTTTCAAATTGGTTTT 119057
|| || || | ||||||| | | ||| |||
Sbjct 913872 CCAAATGCTGCTGAATTTGCTAGGTGGATTT 913842
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057823796699450
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |