Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016- 03-01] 15 sequences; 16,411,463 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq5 86.0 1e-11 >seq5 Length=1485630 Score = 86.0 bits (94), Expect = 1e-11 Identities = 145/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 118847 ATGACCACGGAAATTTTCCGAATCATGGTCATCAAACGTGACCAAAGAATCCAAAACGTC 118906 ||||| ||||||||| | || ||| || ||| |||||||| || | | || Sbjct 914052 ATGACAACGGAAATTCTTAGATCAATGCTCTAYAAAGGTGACCAACTTATTAGAGAAGTT 913993 Query 118907 AAATGGGTTATTTTTGACGAAGTTCATTATATCAATGATAAATCCAGGGGTTCTGTATGG 118966 ||||||||||||||| |||||||| ||||| | |||||| | ||| ||| ||| Sbjct 913992 GGATGGGTTATTTTTGATGAAGTTCACTATATGAGAGATAAAGAACGTGGTGTTGTGTGG 913933 Query 118967 GAAGAGTCAATCATTTTGATGCCGGATACGATGCGCGCTGtttttttGTCTGCAACGGTT 119026 ||||| | ||||| ||| | || |||| | || ||| || | |||||||| | Sbjct 913932 GAAGAAACCATCATCTTGTTACCAGATAATGTTCGATTTGTATTCCTTTCTGCAACTATA 913873 Query 119027 CCGAACGCGGTTGAATTTTCAAATTGGTTTT 119057 || || || | ||||||| | | ||| ||| Sbjct 913872 CCAAATGCTGCTGAATTTGCTAGGTGGATTT 913842 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823796699450