Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016-
03-01] 15 sequences; 16,411,463 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq2 228 8e-55
>seq2
Length=2234776
Score = 228 bits (252), Expect = 8e-55
Identities = 613/931 (66%), Gaps = 45/931 (5%)
Strand=Plus/Minus
Query 15912 TTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTT 15971
|||| |||||| ||| | ||||||||||| |||||||| || | ||||| |||||||
Sbjct 2161569 TTTGATAATCAGAAACTCTCTTTTCGAAGAAATTAGTTTTACCAGCCAAAGAGATATTTT 2161510
Query 15972 CCATAAAATCAAAGGGATTAGTAGC--TGAAAATATCTTAGAGTACCCCAGTTCCGTAAC 16029
|||| || ||||| ||||| | || || ||| ||| || |||| | ||
Sbjct 2161509 CCATGAAGTCAAATGGATTGGAAGAGTTGTAAAC--CTTCTTGTTGCCCAAAGCAAGAAG 2161452
Query 16030 TAATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTA-TAA 16088
|||||||||||| |||||||| | ||| |||||||| | | ||| || || |||| |||
Sbjct 2161451 TAATCTATCTGCAACAAATTCAACATACTGACACATGAGCTTGCAGTTCATACCTAATAA 2161392
Query 16089 GTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGA 16148
| || || | ||| | || || | | ||| || | || ||||| ||||||
Sbjct 2161391 AGAG-ACAGGCAAAGCATCGGTGAAGTAGCCCTTTTCGATTTCGACAGCTTCAGTAATGA 2161333
Query 16149 TATCGGTGGCTCGTGTTTCAG-----ACGGTGTATGGTTTAGGTGTTTAAACATTAGA-- 16201
| | ||||| || | || ||| | | |||| ||| |||
Sbjct 2161332 TCT------------TTTCAACAATAACAGCGTCAGGTCT-GTTGTTCAAATGAGAGAAT 2161286
Query 16202 ------CACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAA 16255
|| || ||||| ||||| ||||| ||||||| ||| | |||||| || ||
Sbjct 2161285 AACAAGCAAGCAAAGTCAGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAGAAT 2161226
Query 16256 GTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAA 16315
|| | || |||||| |||| ||||| | |||||| || | |||||| || |||||
Sbjct 2161225 GTGAGACCAGGCATTAAACCTCTCTTCTTGAGCCAGAAGATAGAAGCAAACGAGCCCGAG 2161166
Query 16316 AAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTA 16375
||||| ||||| ||||||| ||||| || | ||||| ||| | || || || |
Sbjct 2161165 AAGAAAATACCTTCAACAGCAGCAAAGGCAACTAATCTTTCACCAAACAATGCTTCATCG 2161106
Query 16376 TTACGAATCCATTTCTGTA---CCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCT 16432
| | |||||| ||| ||||||| || |||||||| || || || ||||
Sbjct 2161105 TCATTGATCCATC---GTAAAGCCCATTCAGCCTTTTGTTTGATGCATGGAATGTTTTCA 2161049
Query 16433 ATGGCCTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAA 16492
|| || || || || | ||| ||||| | || | ||||| ||||||||||||||
Sbjct 2161048 ATAGCATTGAATAAATAATCTGCTTCCTTTGTGTCCTTGATATAAGTATCAATCAGTAAG 2160989
Query 16493 CTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCC 16552
||| |||| ||||| ||||| || || || || || ||||||||||| ||
Sbjct 2160988 GAGTAAGTTTCAGAGTGGATGTTTTCCATCATGATTTGGAAACCATAGAAGCACTTGGCT 2160929
Query 16553 TCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCA 16612
|| | | ||| ||||| | | || ||| | | || ||||| || ||||| |||
Sbjct 2160928 TCAGGAAGTTGAACTTCAGCTGAGAAGTTTTCTACTAAATTTTCATTAACAATACCATCA 2160869
Query 16613 CTTGCAGCAAAAAACGCCAATATGTGCTT--AATGAAATATTTTTC---GTCAGATGTAA 16667
||||||||| || || || | ||| ||| ||| || |||| |||| |
Sbjct 2160868 GATGCAGCAAAGAAAGCTAAGA--CTCTTGAAATAAAAAATCTTTCATTGTCATTCAAAC 2160811
Query 16668 GAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAG 16727
| | | |||||| | | ||| || || || | ||||||| ||||| ||| ||
Sbjct 2160810 GGTTTTCCCAATCATGAACATCCTTTCCTAAGTCAATCTCTTCTGCAGTCCAGAAGGAAG 2160751
Query 16728 CCACTGCCTTTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAATACGACGTATC 16787
| | || || |||||||||| ||| || |||| |||| || || || | || |||
Sbjct 2160750 CTTCAGCTTTCTTATACATTTGCCAGATTTCATGATATTTAATTGGGAAAAGAACAAATC 2160691
Query 16788 TATCTAAGGATTCCTTTAACACGGGTTCATC 16818
| | | ||||||||||| |||||| ||
Sbjct 2160690 TTTTATCGTTTTCCTTTAACAAGGGTTCGTC 2160660
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511414304109800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |