Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016- 03-01] 15 sequences; 16,411,463 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq5 479 3e-130 seq2 235 7e-57 seq11 152 6e-32 >seq5 Length=1485630 Score = 479 bits (530), Expect = 3e-130 Identities = 1382/2106 (66%), Gaps = 49/2106 (2%) Strand=Plus/Minus Query 52808 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 52867 || || ||||| | || | ||| | || || | | ||||||||| || || || ||| Sbjct 767630 GTAAACTGAATAGCTGCTGCTGCTGCTTGAGTTCTCAAATAGTACATACCAGTCTTAAGA 767571 Query 52868 CCGAGACTCCATCCGTAAAAATGCATACTTGTTAG-TTTGGAATAACTCGGATCTGCTAT 52926 || |||| ||||| ||||||||| || || ||| || | || ||| || Sbjct 767570 CCCTTTTTCCAACCGTAGAAATGCATAGCAGTAAGCTTTTTCATGGTT-GGTTCTCTAAT 767512 Query 52927 ATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 52986 | ||||||||| || || |||||| ||||| | || ||||| |||||||| | || Sbjct 767511 GTAGATATTCATTGACTGTGATTGATCAATGAATGGACCTCTGTCAGCAGCCATATCAAT 767452 Query 52987 GATCGTCTTT-TGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 53045 || | |||| || | | |||||| ||||||| || | | ||| | || | ||||| Sbjct 767451 AAT-GACTTTCTGAGATAATTCCCATGTAGTTTTGTACAATTCCTTCAATTCCTTTGGAA 767393 Query 53046 GGTTTGTA---TTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCATCAT 53102 ||||||| || |||||||| ||| ||| | |||||| | ||||| || ||||| Sbjct 767392 TGTTTGTAATATTTTGAATAGAGCCATTATCAGCGATAATCTTGTTCTTCATAGAATCAT 767333 Query 53103 TCCATAATTTTCTCTCGGTTAAAAC--TC--TAAGGAGATGCGGATTAACTACTTGAAAT 53158 ||| ||| | | | || | || |||| | |||||||| | ||||||| Sbjct 767332 CCCA-AATGCCCAAT---TCAACAAGGTCCTTAAGTAACCATGGATTAACAATTTGAAAT 767277 Query 53159 TCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTA 53218 || |||| ||| ||||| | || ||| |||||| ||||| ||||| | | | ||||| Sbjct 767276 TCACCAGCCAAAACTCTTCTAGAGTAGATATTAGAAGTATATGGTTCGAAACATTCATTG 767217 Query 53219 TTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTA 53278 || | |||||||| ||| |||||||| |||||||| || || || | | |||||| Sbjct 767216 AAACCAAGAATTTGAGAAGTAGATGCAGTTGGCATAGGAGCAACTAAAAGAGAGTTTCTA 767157 Query 53279 AGACCGTATGTTCTG-ATTTTATCTTTT-AGAGGTTCCCAATTCCAAAGATCCGACGGTA 53336 | || ||| | | | || ||| || | || ||||||| ||| | ||| | ||| Sbjct 767156 ATTCC--ATGCTTAGCAACTTGTCTCTTCAAAGAATCCCAATCCCATAAATCAGTTGGTT 767099 Query 53337 CAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTAT 53396 || ||||| ||| ||| || |||| | ||| || | Sbjct 767098 TAATACCCCAAAGATCAAATTGTAATTGACCCTTAGCAGCTGGCGATGTTTTATAAGTTT 767039 Query 53397 CGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTC--GCCTCTAATGCACCGTAATAAAT 53454 || |||||||| | | || | ||| ||| || || | |||| | | ||||| Sbjct 767038 GATAAGGTCCTTCAATTTTGGCCAAGTCA--ACTGAGGCTTCAACTGCAGCATGGTAAAT 766981 Query 53455 GGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAA 53514 ||||| ||||||| |||| | | || ||||| | ||||||||| | |||| Sbjct 766980 AGTTTCAAAGATCTGGATATTCAATTGTTTAGCTTCAGGTGAATCAAATGGCAATCTTAA 766921 Query 53515 GAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATT 53574 ||||| || || | | ||||| ||||||||| | ||||| |||| |||||| || Sbjct 766920 TGCCATAAAGGCATCAGAAAGACCTTGGACACCAATAGCAATAGGCCTATTTCTCTTGTT 766861 Query 53575 AGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTCT 53634 ||| | || || |||| |||||||||||| |||| || ||||| || | || Sbjct 766860 GGAGTACTTGGCCTCAGGAACAGGATAATAATTTCTATCAATGATTTTGTTCAAATTATG 766801 Query 53635 GACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATTGTCCAT-----CTATT 53689 || | || || || || | | ||| |||||| | || | |||| Sbjct 766800 AACCAAGACCTTAGTGACTTCATGTAATTTCTCAAAATCGTACCAACCCTTCTTACTATC 766741 Query 53690 ACAA-----ACATGTTC--AATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAGC 53742 || | | | || || |||| ||| |||| |||||| || || || |||| || Sbjct 766740 ACCAGTAACAAAAGTAGGTAAAGCAAGAGAAGCCAAATTACATACAGCAACTTCATCAGG 766681 Query 53743 ATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTG 53802 | | |||| | || ||| ||| | |||||| | |||||| || | ||| | Sbjct 766680 AGAAGAGTATTCAACAATTTCACAGCATAAATTACTTGATTTGATGACACCAAGATTCTT 766621 Query 53803 TTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAAT 53862 |||||| ||| | ||||| || ||||||||||| |||||||| |||||||||| | Sbjct 766620 TTGATTGGACTTCTCATTACAAGCGTCCTTATAAAGCATGAATGGGACACCAGTTTCAGT 766561 Query 53863 CTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCTT 53922 || | ||| | ||| | | ||| | |||| || | | | || | ||||| Sbjct 766560 TTGAGCTTCCAAAATAGAGTACCAAAGTTTTTGAGCTTTCACTGTTC--TTACAGCTCTT 766503 Query 53923 --TTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAAT 53980 ||| | ||| ||| | |||||| |||||| || | || || || || Sbjct 766502 CCTTCACGTTCATATCTTTCATACAAAGCTTCAAATTCTTTACCGTAACAATCAGATAAA 766443 Query 53981 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 54040 || ||| ||||| || | | || ||||| || ||| || ||| |||| |||||| Sbjct 766442 CCTGGAGCTTCATTAGGTGAAAAGAAAGACCAATCACCGCCAGCCTCAACTCTCTTCATA 766383 Query 54041 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCT 54100 || | |||| |||||| | || | ||||| |||||||| ||| ||| || ||||| Sbjct 766382 AATAAATCACTAATCCATAAGGCAACAAATAAATCTCTGGCTCTGATTTCTTCTTTTCCG 766323 Query 54101 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 54160 ||||||| | | || | ||| | | ||||||| |||||| ||||| ||||||| Sbjct 766322 TGATTCTTTCTCACGTCAATGAAATCAAAGATATCAGGATGCCAAGGTTCTAAGTATAAA 766263 Query 54161 GTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 54220 | | | | ||||| ||||| || || || || || | |||||||| ||||| || || Sbjct 766262 GCGAAAGCACCAGGGCGTTTATTACCACCTTGGTCCACATATCTAGCAGTGTTGTTGAAA 766203 Query 54221 ACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCA 54280 || | || ||| || ||||||||||| |||| || || || || | ||||| ||| Sbjct 766202 ACACGCATCATGGGGATAATACCATTAGATGTTCCGTTAGTACCAGCAATATAAGAACCA 766143 Query 54281 CTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCG 54340 | | | ||||||| || || ||| || || || || | || || || ||||| Sbjct 766142 GTTGATCTAATATTATGGATATGTAAACCAATACCACCAGCAGTCTTGGAAATCAATGCA 766083 Query 54341 CATCGTTTTAA-CGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAA 54399 ||| ||||||| ||||| || ||||| || || ||| ||| ||||| || | || Sbjct 766082 CAT-GTTTTAAGAGTATCGTAAATGCCTTCAATTGAATCTTCCTTCATGGCAACCAAGAA 766024 Query 54400 ACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGT 54459 ||| ||||||||| | || || || |||||||| || ||||| || || || || Sbjct 766023 ACAAGAAGACATTTGAGGTTGAGGTGTACCAGCATTAAACAAAGTAGGTGATGCATGAGT 765964 Query 54460 AAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTG--A 54517 || | || ||| | | ||| || || | |||| | | | | || ||| | | Sbjct 765963 GAAATACTTCAAAGACATCAAATTATAAGTTTTGATAAC--ATTATCAATGTCATCGCCA 765906 Query 54518 TGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTT 54577 ||||| || || || || | ||| | ||||||||| ||||||||| ||| ||| | | Sbjct 765905 TGAATACCAACAGCAACTCTCATAATCATGTGCTGGGGTCTTTCAGCGACTTTGCCATCT 765846 Query 54578 ATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGT 54635 | | | | || || ||| || || ||||| |||||||| || || || ||||| | Sbjct 765845 ACTCTTAATAAATAAGATCGCTCTAATGTTTTGAAACCAAAGTAATTATAGTTGAAA--T 765788 Query 54636 CTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGG 54695 | ||||| |||| |||| | || || | || || | || | | || | || | Sbjct 765787 CGCGTTCATAAACAATAGCCGAATTCAATTCTTCTTCATGTCTTGCAATAATGTCATAAG 765728 Query 54696 TAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAAATAAAT 54755 | |||| || || ||||||||||| | || |||| || | || | | ||||| Sbjct 765727 TCTCCTTTGAGATCATAGGAGAATGTTTTCTCGTTCTAGGGTTAATGTATTCATATAAAA 765668 Query 54756 CCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTC 54815 ||||||| |||| | ||| |||| | |||| ||| || |||||||| || || |||| Sbjct 765667 CCTTCATGACTTGAGAGAATTGTTTGATGGTTTGTTTATGGAGATTTGAAACAGCAATTC 765608 Query 54816 TAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTG 54875 |||| || | ||| |||||||| ||||| ||||| | ||| || ||||| || | Sbjct 765607 TAGCAGCCAAAATAGCATAATCAGGATGAATAGTAGTCATATAGGCAGCAATTTCAGCCG 765548 Query 54876 TCAGAG 54881 | ||| Sbjct 765547 CCTGAG 765542 >seq2 Length=2234776 Score = 235 bits (260), Expect = 7e-57 Identities = 609/915 (67%), Gaps = 36/915 (4%) Strand=Plus/Minus Query 23828 AGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACC 23887 || |||||| || ||||| || ||| || | |||||||| |||||||||||||| Sbjct 2161586 AGCCATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCGAAGAAATTAGTTTTACC 2161527 Query 23888 TTCTAATGATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGA--TTCTTTTA 23945 | || || |||||||||||||| || ||||||||| | || || | ||||| | Sbjct 2161526 AGCCAAAGAGATATTTTCCATGAAGTCAAATGGATTGGAAGAGTTGTAAACCTTCTTGTT 2161467 Query 23946 AATCCCAATTCAGAAATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCA 24005 ||||| || || ||||||||||| ||||| || | ||| ||| | | Sbjct 2161466 G--CCCAAAGCAAGAAGTAATCTATCTGCAACAAATTCAACATACTGACACATGAGCTTG 2161409 Query 24006 CAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGA 24064 || ||||| |||| | || || | ||| | || ||| | ||| ||| || Sbjct 2161408 CAGTTCATACCTAATAAAGAGACAGGCAAAGCATCGGTGAAGTAGCCCTT-TTCGATTTC 2161350 Query 24065 GACCGCGTCTGTTATAATAGATCTT----ACTGTTTCT---TCAC-TCGGTGGATACAAT 24116 ||| || || || || |||||| || | | ||| || || | | ||| Sbjct 2161349 GACAGCTTCAGTAAT----GATCTTTTCAACAATAACAGCGTCAGGTCTGTTGTTCAAAT 2161294 Query 24117 AAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAAT 24176 | | ||| ||| || || || || |||| ||| || ||||| | || ||| Sbjct 2161293 GAGAGAATAA----CAAGCAAGCAAAGTCAGTATGTAAACCTTCATCTCTGCAGATCAAT 2161238 Query 24177 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA 24236 ||||| || || ||||| || ||||||| || | ||| || ||||| || || || ||| Sbjct 2161237 TCGTTAGAGAATGTGAGACCAGGCATTAAACCTCTCTTCTTGAGCCAGAAGATAGAAGCA 2161178 Query 24237 AATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAA 24296 || || || || |||||||| ||||| || || |||||||||| | |||||| ||| || Sbjct 2161177 AACGAGCCCGAGAAGAAAATACCTTCAACAGCAGCAAAGGCAACTAATCTTTCACCA-AA 2161119 Query 24297 C----CGGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 24352 | | | ||||| ||||| | |||||| || ||||| | ||| | || || Sbjct 2161118 CAATGCTTCATCGTCATTGATCCATCGTAAAGCCCATTCAGCCTTTTGTTTGATGCATGG 2161059 Query 24353 CATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATC 24412 || | || |||||||| || | ||| | | ||| || | || || | ||| ||||| Sbjct 2161058 AATGTTTTCAATAGCATTGAATAAATAATCTGCTTCCTTTGTGTCCTTGATATAAGTATC 2160999 Query 24413 AATCA--AAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAG 24470 ||||| || || || |||| || || |||||||| || ||||| || || ||| Sbjct 2160998 AATCAGTAAGGAGTAAG--TTTCAGAGTGGATGTTTTCCATCATGATTTGGAAACCATAG 2160941 Query 24471 AAACATCTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTC 24530 || || | || || | || || ||||| | || |||| ||||||||||||| Sbjct 2160940 AAGCACTTGGCTTCAGGAAGTTGAACTTCAGCTGAGAAGTTTTCTACTAAATTTTCATTA 2160881 Query 24531 ACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCT 24590 || || || ||| || ||||| || || || || | |||||| || |||| | | Sbjct 2160880 ACAATACCATCAGATGCAGCAAAGAAAGCTAAGACTCTTGAAATAAAAAATCTTTCAT-T 2160822 Query 24591 GGTGTT----AGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGT 24646 | || | || | |||||||| | ||| || || || | ||||| | || Sbjct 2160821 GTCATTCAAACGGTTTTCCCAATCATGAACATCCTTTCCTAAGTCAATCTCTTCTGCAGT 2160762 Query 24647 CCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAA 24706 ||| || || || || || || |||||||| | |||||| |||||||||| |||||| || Sbjct 2160761 CCAGAAGGAAGCTTCAGCTTTCTTATACATTTGCCAGATTTCATGATATTTAATTGGGAA 2160702 Query 24707 AATAACAAATCTATT 24721 || ||||||||| || Sbjct 2160701 AAGAACAAATCTTTT 2160687 >seq11 Length=408711 Score = 152 bits (168), Expect = 6e-32 Identities = 392/590 (66%), Gaps = 6/590 (1%) Strand=Plus/Plus Query 54035 TTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTC 54093 |||||||| || || || ||||| | || ||| || || || | | ||| || || Sbjct 180846 TTCATAAATAGGTCGGGTATCCATAATGC-ATAGAAGAGGTCACGAGCTCTTAACTCTTC 180904 Query 54094 GTTTCCTGTATTCTTT-TTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCA 54152 || || ||| ||| ||||| || ||||| | | |||||| |||||| ||||| | Sbjct 180905 TTTACCATGATTTTTTCTTAAG-TCAAGGAATTCGAATATATCATTATGCCATGGTTCAA 180963 Query 54153 AGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGT 54212 |||||| | | | | || || | ||||||||| || ||||| | ||||||||| |||| Sbjct 180964 GGTATATTGCAAAAGCGCCCGGTCTTTTGTTTCCCCCTTGATCAACGTATCTAGCAGTGT 181023 Query 54213 TATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATAT 54272 |||| |||||| |||||| |||| | ||||| || | ||| || || || || | Sbjct 181024 TATTGAAAACTCGCAACATGGGAACTAACCCATTCGAGGTACCGTTAGTTCCTCTTATGT 181083 Query 54273 AGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGA 54332 || || || | | ||||||| || || ||||| || || || | || |||| Sbjct 181084 AGGAACCTCTAGATCTAATATTATGAACACTTAAGCCTATTCCACCAGCGAACTTGGAGA 181143 Query 54333 TTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAA 54392 | ||| || | || || | || || || ||| ||||||| |||| | Sbjct 181144 TACTTGCACAATCTGCCAATGTCTTGTATATTCCTGTGATAGAATCATCCGACATGGCCA 181203 Query 54393 GTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAG 54452 ||||||||| |||| ||| | | | ||||| | ||||||||| || |||| || Sbjct 181204 AGAGAAAACAGGATGACAATTGCGGGAAAATGGTTCCTGAATTAAATAATGTTGGAGTAG 181263 Query 54453 CGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCC 54512 | || |||| | | | || | || | ||| || || | || || | | |||| Sbjct 181264 CATGAATAAAGTACCTCTTGGACATTAACTCGTATGTTTCAAAGGCAGACTTCAAATCCT 181323 Query 54513 ATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT 54572 || || || || | || || | ||| ||||| | || ||| |||| | || || | Sbjct 181324 CTTTGTGTATGCCAATAGCTACTCTCATCAACATATATTGRGGTGTTTCTATAATTTT-T 181382 Query 54573 TGTTTAT-TTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATA 54621 || || |||||||||||| |||||||||| |||||| || || || || Sbjct 181383 CCTTCATATTTCAGCAAGTATGATTTTTCCAGAGTTTTGAACCCGAAGTA 181432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721488677200