Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016-
03-01] 15 sequences; 16,411,463 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq5 479 3e-130
seq2 235 7e-57
seq11 152 6e-32
>seq5
Length=1485630
Score = 479 bits (530), Expect = 3e-130
Identities = 1382/2106 (66%), Gaps = 49/2106 (2%)
Strand=Plus/Minus
Query 52808 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 52867
|| || ||||| | || | ||| | || || | | ||||||||| || || || |||
Sbjct 767630 GTAAACTGAATAGCTGCTGCTGCTGCTTGAGTTCTCAAATAGTACATACCAGTCTTAAGA 767571
Query 52868 CCGAGACTCCATCCGTAAAAATGCATACTTGTTAG-TTTGGAATAACTCGGATCTGCTAT 52926
|| |||| ||||| ||||||||| || || ||| || | || ||| ||
Sbjct 767570 CCCTTTTTCCAACCGTAGAAATGCATAGCAGTAAGCTTTTTCATGGTT-GGTTCTCTAAT 767512
Query 52927 ATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 52986
| ||||||||| || || |||||| ||||| | || ||||| |||||||| | ||
Sbjct 767511 GTAGATATTCATTGACTGTGATTGATCAATGAATGGACCTCTGTCAGCAGCCATATCAAT 767452
Query 52987 GATCGTCTTT-TGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 53045
|| | |||| || | | |||||| ||||||| || | | ||| | || | |||||
Sbjct 767451 AAT-GACTTTCTGAGATAATTCCCATGTAGTTTTGTACAATTCCTTCAATTCCTTTGGAA 767393
Query 53046 GGTTTGTA---TTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCATCAT 53102
||||||| || |||||||| ||| ||| | |||||| | ||||| || |||||
Sbjct 767392 TGTTTGTAATATTTTGAATAGAGCCATTATCAGCGATAATCTTGTTCTTCATAGAATCAT 767333
Query 53103 TCCATAATTTTCTCTCGGTTAAAAC--TC--TAAGGAGATGCGGATTAACTACTTGAAAT 53158
||| ||| | | | || | || |||| | |||||||| | |||||||
Sbjct 767332 CCCA-AATGCCCAAT---TCAACAAGGTCCTTAAGTAACCATGGATTAACAATTTGAAAT 767277
Query 53159 TCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTA 53218
|| |||| ||| ||||| | || ||| |||||| ||||| ||||| | | | |||||
Sbjct 767276 TCACCAGCCAAAACTCTTCTAGAGTAGATATTAGAAGTATATGGTTCGAAACATTCATTG 767217
Query 53219 TTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTA 53278
|| | |||||||| ||| |||||||| |||||||| || || || | | ||||||
Sbjct 767216 AAACCAAGAATTTGAGAAGTAGATGCAGTTGGCATAGGAGCAACTAAAAGAGAGTTTCTA 767157
Query 53279 AGACCGTATGTTCTG-ATTTTATCTTTT-AGAGGTTCCCAATTCCAAAGATCCGACGGTA 53336
| || ||| | | | || ||| || | || ||||||| ||| | ||| | |||
Sbjct 767156 ATTCC--ATGCTTAGCAACTTGTCTCTTCAAAGAATCCCAATCCCATAAATCAGTTGGTT 767099
Query 53337 CAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTAT 53396
|| ||||| ||| ||| || |||| | ||| || |
Sbjct 767098 TAATACCCCAAAGATCAAATTGTAATTGACCCTTAGCAGCTGGCGATGTTTTATAAGTTT 767039
Query 53397 CGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTC--GCCTCTAATGCACCGTAATAAAT 53454
|| |||||||| | | || | ||| ||| || || | |||| | | |||||
Sbjct 767038 GATAAGGTCCTTCAATTTTGGCCAAGTCA--ACTGAGGCTTCAACTGCAGCATGGTAAAT 766981
Query 53455 GGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAA 53514
||||| ||||||| |||| | | || ||||| | ||||||||| | ||||
Sbjct 766980 AGTTTCAAAGATCTGGATATTCAATTGTTTAGCTTCAGGTGAATCAAATGGCAATCTTAA 766921
Query 53515 GAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATT 53574
||||| || || | | ||||| ||||||||| | ||||| |||| |||||| ||
Sbjct 766920 TGCCATAAAGGCATCAGAAAGACCTTGGACACCAATAGCAATAGGCCTATTTCTCTTGTT 766861
Query 53575 AGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTCT 53634
||| | || || |||| |||||||||||| |||| || ||||| || | ||
Sbjct 766860 GGAGTACTTGGCCTCAGGAACAGGATAATAATTTCTATCAATGATTTTGTTCAAATTATG 766801
Query 53635 GACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATTGTCCAT-----CTATT 53689
|| | || || || || | | ||| |||||| | || | ||||
Sbjct 766800 AACCAAGACCTTAGTGACTTCATGTAATTTCTCAAAATCGTACCAACCCTTCTTACTATC 766741
Query 53690 ACAA-----ACATGTTC--AATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAGC 53742
|| | | | || || |||| ||| |||| |||||| || || || |||| ||
Sbjct 766740 ACCAGTAACAAAAGTAGGTAAAGCAAGAGAAGCCAAATTACATACAGCAACTTCATCAGG 766681
Query 53743 ATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTG 53802
| | |||| | || ||| ||| | |||||| | |||||| || | ||| |
Sbjct 766680 AGAAGAGTATTCAACAATTTCACAGCATAAATTACTTGATTTGATGACACCAAGATTCTT 766621
Query 53803 TTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAAT 53862
|||||| ||| | ||||| || ||||||||||| |||||||| |||||||||| |
Sbjct 766620 TTGATTGGACTTCTCATTACAAGCGTCCTTATAAAGCATGAATGGGACACCAGTTTCAGT 766561
Query 53863 CTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCTT 53922
|| | ||| | ||| | | ||| | |||| || | | | || | |||||
Sbjct 766560 TTGAGCTTCCAAAATAGAGTACCAAAGTTTTTGAGCTTTCACTGTTC--TTACAGCTCTT 766503
Query 53923 --TTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAAT 53980
||| | ||| ||| | |||||| |||||| || | || || || ||
Sbjct 766502 CCTTCACGTTCATATCTTTCATACAAAGCTTCAAATTCTTTACCGTAACAATCAGATAAA 766443
Query 53981 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 54040
|| ||| ||||| || | | || ||||| || ||| || ||| |||| ||||||
Sbjct 766442 CCTGGAGCTTCATTAGGTGAAAAGAAAGACCAATCACCGCCAGCCTCAACTCTCTTCATA 766383
Query 54041 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCT 54100
|| | |||| |||||| | || | ||||| |||||||| ||| ||| || |||||
Sbjct 766382 AATAAATCACTAATCCATAAGGCAACAAATAAATCTCTGGCTCTGATTTCTTCTTTTCCG 766323
Query 54101 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 54160
||||||| | | || | ||| | | ||||||| |||||| ||||| |||||||
Sbjct 766322 TGATTCTTTCTCACGTCAATGAAATCAAAGATATCAGGATGCCAAGGTTCTAAGTATAAA 766263
Query 54161 GTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 54220
| | | | ||||| ||||| || || || || || | |||||||| ||||| || ||
Sbjct 766262 GCGAAAGCACCAGGGCGTTTATTACCACCTTGGTCCACATATCTAGCAGTGTTGTTGAAA 766203
Query 54221 ACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCA 54280
|| | || ||| || ||||||||||| |||| || || || || | ||||| |||
Sbjct 766202 ACACGCATCATGGGGATAATACCATTAGATGTTCCGTTAGTACCAGCAATATAAGAACCA 766143
Query 54281 CTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCG 54340
| | | ||||||| || || ||| || || || || | || || || |||||
Sbjct 766142 GTTGATCTAATATTATGGATATGTAAACCAATACCACCAGCAGTCTTGGAAATCAATGCA 766083
Query 54341 CATCGTTTTAA-CGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAA 54399
||| ||||||| ||||| || ||||| || || ||| ||| ||||| || | ||
Sbjct 766082 CAT-GTTTTAAGAGTATCGTAAATGCCTTCAATTGAATCTTCCTTCATGGCAACCAAGAA 766024
Query 54400 ACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGT 54459
||| ||||||||| | || || || |||||||| || ||||| || || || ||
Sbjct 766023 ACAAGAAGACATTTGAGGTTGAGGTGTACCAGCATTAAACAAAGTAGGTGATGCATGAGT 765964
Query 54460 AAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTG--A 54517
|| | || ||| | | ||| || || | |||| | | | | || ||| | |
Sbjct 765963 GAAATACTTCAAAGACATCAAATTATAAGTTTTGATAAC--ATTATCAATGTCATCGCCA 765906
Query 54518 TGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTT 54577
||||| || || || || | ||| | ||||||||| ||||||||| ||| ||| | |
Sbjct 765905 TGAATACCAACAGCAACTCTCATAATCATGTGCTGGGGTCTTTCAGCGACTTTGCCATCT 765846
Query 54578 ATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGT 54635
| | | | || || ||| || || ||||| |||||||| || || || ||||| |
Sbjct 765845 ACTCTTAATAAATAAGATCGCTCTAATGTTTTGAAACCAAAGTAATTATAGTTGAAA--T 765788
Query 54636 CTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGG 54695
| ||||| |||| |||| | || || | || || | || | | || | || |
Sbjct 765787 CGCGTTCATAAACAATAGCCGAATTCAATTCTTCTTCATGTCTTGCAATAATGTCATAAG 765728
Query 54696 TAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAAATAAAT 54755
| |||| || || ||||||||||| | || |||| || | || | | |||||
Sbjct 765727 TCTCCTTTGAGATCATAGGAGAATGTTTTCTCGTTCTAGGGTTAATGTATTCATATAAAA 765668
Query 54756 CCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTC 54815
||||||| |||| | ||| |||| | |||| ||| || |||||||| || || ||||
Sbjct 765667 CCTTCATGACTTGAGAGAATTGTTTGATGGTTTGTTTATGGAGATTTGAAACAGCAATTC 765608
Query 54816 TAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTG 54875
|||| || | ||| |||||||| ||||| ||||| | ||| || ||||| || |
Sbjct 765607 TAGCAGCCAAAATAGCATAATCAGGATGAATAGTAGTCATATAGGCAGCAATTTCAGCCG 765548
Query 54876 TCAGAG 54881
| |||
Sbjct 765547 CCTGAG 765542
>seq2
Length=2234776
Score = 235 bits (260), Expect = 7e-57
Identities = 609/915 (67%), Gaps = 36/915 (4%)
Strand=Plus/Minus
Query 23828 AGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACC 23887
|| |||||| || ||||| || ||| || | |||||||| ||||||||||||||
Sbjct 2161586 AGCCATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCGAAGAAATTAGTTTTACC 2161527
Query 23888 TTCTAATGATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGA--TTCTTTTA 23945
| || || |||||||||||||| || ||||||||| | || || | ||||| |
Sbjct 2161526 AGCCAAAGAGATATTTTCCATGAAGTCAAATGGATTGGAAGAGTTGTAAACCTTCTTGTT 2161467
Query 23946 AATCCCAATTCAGAAATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCA 24005
||||| || || ||||||||||| ||||| || | ||| ||| | |
Sbjct 2161466 G--CCCAAAGCAAGAAGTAATCTATCTGCAACAAATTCAACATACTGACACATGAGCTTG 2161409
Query 24006 CAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGA 24064
|| ||||| |||| | || || | ||| | || ||| | ||| ||| ||
Sbjct 2161408 CAGTTCATACCTAATAAAGAGACAGGCAAAGCATCGGTGAAGTAGCCCTT-TTCGATTTC 2161350
Query 24065 GACCGCGTCTGTTATAATAGATCTT----ACTGTTTCT---TCAC-TCGGTGGATACAAT 24116
||| || || || || |||||| || | | ||| || || | | |||
Sbjct 2161349 GACAGCTTCAGTAAT----GATCTTTTCAACAATAACAGCGTCAGGTCTGTTGTTCAAAT 2161294
Query 24117 AAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAAT 24176
| | ||| ||| || || || || |||| ||| || ||||| | || |||
Sbjct 2161293 GAGAGAATAA----CAAGCAAGCAAAGTCAGTATGTAAACCTTCATCTCTGCAGATCAAT 2161238
Query 24177 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA 24236
||||| || || ||||| || ||||||| || | ||| || ||||| || || || |||
Sbjct 2161237 TCGTTAGAGAATGTGAGACCAGGCATTAAACCTCTCTTCTTGAGCCAGAAGATAGAAGCA 2161178
Query 24237 AATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAA 24296
|| || || || |||||||| ||||| || || |||||||||| | |||||| ||| ||
Sbjct 2161177 AACGAGCCCGAGAAGAAAATACCTTCAACAGCAGCAAAGGCAACTAATCTTTCACCA-AA 2161119
Query 24297 C----CGGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 24352
| | | ||||| ||||| | |||||| || ||||| | ||| | || ||
Sbjct 2161118 CAATGCTTCATCGTCATTGATCCATCGTAAAGCCCATTCAGCCTTTTGTTTGATGCATGG 2161059
Query 24353 CATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATC 24412
|| | || |||||||| || | ||| | | ||| || | || || | ||| |||||
Sbjct 2161058 AATGTTTTCAATAGCATTGAATAAATAATCTGCTTCCTTTGTGTCCTTGATATAAGTATC 2160999
Query 24413 AATCA--AAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAG 24470
||||| || || || |||| || || |||||||| || ||||| || || |||
Sbjct 2160998 AATCAGTAAGGAGTAAG--TTTCAGAGTGGATGTTTTCCATCATGATTTGGAAACCATAG 2160941
Query 24471 AAACATCTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTC 24530
|| || | || || | || || ||||| | || |||| |||||||||||||
Sbjct 2160940 AAGCACTTGGCTTCAGGAAGTTGAACTTCAGCTGAGAAGTTTTCTACTAAATTTTCATTA 2160881
Query 24531 ACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCT 24590
|| || || ||| || ||||| || || || || | |||||| || |||| | |
Sbjct 2160880 ACAATACCATCAGATGCAGCAAAGAAAGCTAAGACTCTTGAAATAAAAAATCTTTCAT-T 2160822
Query 24591 GGTGTT----AGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGT 24646
| || | || | |||||||| | ||| || || || | ||||| | ||
Sbjct 2160821 GTCATTCAAACGGTTTTCCCAATCATGAACATCCTTTCCTAAGTCAATCTCTTCTGCAGT 2160762
Query 24647 CCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAA 24706
||| || || || || || || |||||||| | |||||| |||||||||| |||||| ||
Sbjct 2160761 CCAGAAGGAAGCTTCAGCTTTCTTATACATTTGCCAGATTTCATGATATTTAATTGGGAA 2160702
Query 24707 AATAACAAATCTATT 24721
|| ||||||||| ||
Sbjct 2160701 AAGAACAAATCTTTT 2160687
>seq11
Length=408711
Score = 152 bits (168), Expect = 6e-32
Identities = 392/590 (66%), Gaps = 6/590 (1%)
Strand=Plus/Plus
Query 54035 TTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTC 54093
|||||||| || || || ||||| | || ||| || || || | | ||| || ||
Sbjct 180846 TTCATAAATAGGTCGGGTATCCATAATGC-ATAGAAGAGGTCACGAGCTCTTAACTCTTC 180904
Query 54094 GTTTCCTGTATTCTTT-TTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCA 54152
|| || ||| ||| ||||| || ||||| | | |||||| |||||| ||||| |
Sbjct 180905 TTTACCATGATTTTTTCTTAAG-TCAAGGAATTCGAATATATCATTATGCCATGGTTCAA 180963
Query 54153 AGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGT 54212
|||||| | | | | || || | ||||||||| || ||||| | ||||||||| ||||
Sbjct 180964 GGTATATTGCAAAAGCGCCCGGTCTTTTGTTTCCCCCTTGATCAACGTATCTAGCAGTGT 181023
Query 54213 TATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATAT 54272
|||| |||||| |||||| |||| | ||||| || | ||| || || || || |
Sbjct 181024 TATTGAAAACTCGCAACATGGGAACTAACCCATTCGAGGTACCGTTAGTTCCTCTTATGT 181083
Query 54273 AGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGA 54332
|| || || | | ||||||| || || ||||| || || || | || ||||
Sbjct 181084 AGGAACCTCTAGATCTAATATTATGAACACTTAAGCCTATTCCACCAGCGAACTTGGAGA 181143
Query 54333 TTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAA 54392
| ||| || | || || | || || || ||| ||||||| |||| |
Sbjct 181144 TACTTGCACAATCTGCCAATGTCTTGTATATTCCTGTGATAGAATCATCCGACATGGCCA 181203
Query 54393 GTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAG 54452
||||||||| |||| ||| | | | ||||| | ||||||||| || |||| ||
Sbjct 181204 AGAGAAAACAGGATGACAATTGCGGGAAAATGGTTCCTGAATTAAATAATGTTGGAGTAG 181263
Query 54453 CGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCC 54512
| || |||| | | | || | || | ||| || || | || || | | ||||
Sbjct 181264 CATGAATAAAGTACCTCTTGGACATTAACTCGTATGTTTCAAAGGCAGACTTCAAATCCT 181323
Query 54513 ATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT 54572
|| || || || | || || | ||| ||||| | || ||| |||| | || || |
Sbjct 181324 CTTTGTGTATGCCAATAGCTACTCTCATCAACATATATTGRGGTGTTTCTATAATTTT-T 181382
Query 54573 TGTTTAT-TTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATA 54621
|| || |||||||||||| |||||||||| |||||| || || || ||
Sbjct 181383 CCTTCATATTTCAGCAAGTATGATTTTTCCAGAGTTTTGAACCCGAAGTA 181432
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593721488677200
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