Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016-
03-01] 15 sequences; 16,411,463 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq1 154 2e-32
seq7 116 6e-21
>seq1
Length=2480924
Score = 154 bits (170), Expect = 2e-32
Identities = 177/238 (74%), Gaps = 0/238 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || ||| | ||||| | || || ||||| || || |||| ||||| ||
Sbjct 1873265 ATGCAGATCTTTGTTAAGACCTTGACTGGTAAAACCATCACATTAGAAGTTGAATCATCA 1873324
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || ||| ||| | || || |||||||| || |||||||| ||||| |||||
Sbjct 1873325 GACACTATTGACAATGTCAAGAGTAAGATTCAAGACAAGGAAGGTATTCCACCAGATCAG 1873384
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||||| || || ||||| ||||| |||||||| || | ||||| || || || |||
Sbjct 1873385 CAAAGACTCATCTTTGCTGGAAAGCAATTAGAAGACGGACGAACTCTATCGGACTACAAT 1873444
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776
|||||||| |||||||| || |||||||| |||||| || |||||||||| ||| ||
Sbjct 1873445 ATTCAAAAGGAATCAACATTACATTTGGTGTTACGTCTAAGAGGTGGTATGCAAATTT 1873502
Score = 154 bits (170), Expect = 2e-32
Identities = 177/238 (74%), Gaps = 0/238 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| || | ||||| | || || ||||| || || |||| ||||| ||
Sbjct 1873493 ATGCAAATTTTCGTGAAGACYTTGACTGGTAAAACCATCACATTAGAAGTTGAATCATCA 1873552
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || ||| ||| | || || |||||||| || |||||||| ||||| |||||
Sbjct 1873553 GACACTATTGACAATGTCAAGAGTAAGATTCAAGACAAGGAAGGTATTCCACCAGATCAG 1873612
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||||| || || ||||| ||||| |||||||| || | ||||| || || || |||
Sbjct 1873613 CAAAGACTCATCTTTGCTGGAAAGCAATTAGAAGACGGACGAACTCTATCGGACTACAAT 1873672
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776
|||||||| |||||||| || |||||||| |||||| || |||||||||| ||| ||
Sbjct 1873673 ATTCAAAAGGAATCAACATTACATTTGGTGTTACGTCTAAGAGGTGGTATGCAAATTT 1873730
Score = 154 bits (170), Expect = 2e-32
Identities = 177/238 (74%), Gaps = 0/238 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| || | ||||| | || || ||||| || || |||| ||||| ||
Sbjct 1873721 ATGCAAATTTTCGTGAAGACYTTGACTGGTAAAACCATCACATTAGAAGTTGAATCATCA 1873780
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || ||| ||| | || || |||||||| || |||||||| ||||| |||||
Sbjct 1873781 GACACTATTGACAATGTCAAGAGTAAGATTCAAGACAAGGAAGGTATTCCACCAGATCAG 1873840
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||||| || || ||||| ||||| |||||||| || | ||||| || || || |||
Sbjct 1873841 CAAAGACTCATCTTTGCTGGAAAGCAATTAGAAGACGGACGAACTCTATCGGACTACAAT 1873900
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776
|||||||| |||||||| || |||||||| |||||| || |||||||||| ||| ||
Sbjct 1873901 ATTCAAAAGGAATCAACATTACATTTGGTGTTACGTCTAAGAGGTGGTATGCAAATTT 1873958
Score = 145 bits (160), Expect = 1e-29
Identities = 169/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| || | ||||| | || || ||||| || || |||| ||||| ||
Sbjct 1873949 ATGCAAATTTTCGTGAAGACCTTGACTGGTAAAACCATCACATTAGAAGTTGAATCATCA 1874008
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || ||| ||| | || || |||||||| || |||||||| ||||| |||||
Sbjct 1874009 GACACTATTGACAATGTCAAGAGTAAGATTCAAGACAAGGAAGGTATTCCACCAGATCAG 1874068
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||||| || || ||||| ||||| |||||||| || | ||||| || || || |||
Sbjct 1874069 CAAAGACTCATCTTTGCTGGAAAGCAATTAGAAGACGGACGAACTCTATCGGACTACAAT 1874128
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766
|||||||| |||||||| || |||||||| |||||| | ||||||||
Sbjct 1874129 ATTCAAAAGGAATCAACATTACATTTGGTGTTACGTCTTAGAGGTGGT 1874176
>seq7
Length=1328185
Score = 116 bits (128), Expect = 6e-21
Identities = 385/597 (64%), Gaps = 24/597 (4%)
Strand=Plus/Minus
Query 205383 ATGATTAACATATATATGTGCATTACCAATATTATGAATAAATTCATATGGTTTTAAATT 205442
||||| | ||||||||| |||| ||| | |||||||||| || | |||||
Sbjct 1158365 ATGATCTAAATATATATGGGCATCACCTAAGGTATGAATAAAATCTCCACAATCCAAATT 1158306
Query 205443 AGTTAAATGTGCAATCATATAAGTCAATAAACTATAACTAGCAACATTAAATGGTACACC 205502
| ||| || ||||| | || |||| |||| || | |||||||||||| ||
Sbjct 1158305 GCAAACATGAGCGATCATTTTTGTTAATAGTGCATAAGATGCTATATTAAATGGTACTCC 1158246
Query 205503 TAAACCCATATC--AGCTGATCTTTGATACATTTGACATGTAAGATAT---TTATTATTA 205557
|||||||||||| |||| || ||||| | | ||||| | | | |||||| ||
Sbjct 1158245 TAAACCCATATCGCAGCT--TCGCTGATATAATACACATGACAATTCTCCTTTATTAGTA 1158188
Query 205558 A---------------TTACATGAAATTGTACAAAACAATGACAAGGTGGTATAACCATA 205602
|||||| ||||| | ||| |||||| || |||| | ||||
Sbjct 1158187 GGACCATTAGGGTAGCTTACATAGAATTGAGCGAAAATATGACAGGGGGGTAGAGCCATT 1158128
Query 205603 TTTTCAACATCTATAGGATTCCAGGCTGTTAATATTATATTTCTAGATTCAGGtttattt 205662
||| | ||| | || ||||| || | || || || | ||| | ||| ||| |
Sbjct 1158127 TTTGGGAAATCCTTTGGGTTCCAAGCACTGAAAATAATTCTCCTATCATAAGGATTAGTC 1158068
Query 205663 tttattttatttatAATATGTGTTAATTGATCAAATCCTTGATTTGTATAATTTGTATCC 205722
|| | |||| || | || | ||||||||||| |||| ||| || | | ||
Sbjct 1158067 TTAAGCTTATGAATGACATCAGCTAATTGATCAACGCCTTTGCCTGTGTAGTCGGCGTCG 1158008
Query 205723 ATATCAATATATTTAGCACCAAAATGACGCCATTGAAAACCATAAACTGGACCTAAATCA 205782
||| |||||| |||||||||||||||||||||||| |||||||| || ||||| ||
Sbjct 1158007 CAATCCGTATATTCAGCACCAAAATGACGCCATTGAAACCCATAAACAGGCCCTAAGTCT 1157948
Query 205783 CCTTCTTTTCTATCATTAAAACCACGtttttttatatattttaatgatccattttcatcc 205842
|| || | ||| || | || ||| | | | ||| | |||||| |||||
Sbjct 1157947 CCCTCACGACGATCTTTCAGCCCGATTTTATCCAGAAATTCTCTGCTTCCATTACCATCC 1157888
Query 205843 caaatatggattcctttattttttaGAATATTT-GTATTAGTTGATCCAGATATAAACCA 205901
|| || | | ||||| | || ||| ||| | || || |||| || |||||
Sbjct 1157887 CATATTTTTACACCTTTCTCAGATA-AATGTTTGGCGTTGGTATCGCCAGCAATGAACCA 1157829
Query 205902 TAATAATTCTTCAACAATTCCTCTCCAAAACATTGATTTTGTTGTAAATAATGGAAA 205958
|| || |||| | ||||||| || ||||| |||||| || | || |||||
Sbjct 1157828 TAGTAGTTCTAGCAAAATTCCTTTCAGAAACACCTTTTTTGTCGTCAGCAACGGAAA 1157772
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755455858352000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |