Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016- 03-01] 15 sequences; 16,411,463 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq2 98.7 2e-15 >seq2 Length=2234776 Score = 98.7 bits (108), Expect = 2e-15 Identities = 126/174 (72%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 135600 AGATAAAGACGAGTGGACTACGTGGaaaaaaaTACCCGATCCTGTTTTGCATATAGAACT 135659 ||||||||||||||||||||| |||| | | ||||||||||| ||||| ||| | Sbjct 1397855 AGATAAAGACGAGTGGACTACTTGGACAGCCCGTACAGATCCTGTTTTACATATTGAATT 1397914 Query 135660 TAGGAGATGGGCGGATGTTTTTATTATAGCGCCCTTAACGGCAAATACGTTAGCAAAAAT 135719 | || ||||| ||| | || | ||||| || |||| |||||||| || || || Sbjct 1397915 ACGCAGGTGGGCAGATATATTAGTGATAGCACCACTAACTGCAAATACTTTGAGTAAGAT 1397974 Query 135720 AGCTAATGGTATATGCGATAATTTACTGACGTCTATTGTAAGAGCCTGGGATAC 135773 ||| |||| |||| |||||| || |||| | | || ||||| ||| |||| Sbjct 1397975 AGCCCTTGGTTTATGTGATAATCTATTGACTAATGTGGTCAGAGCTTGGAATAC 1398028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923196626900600