Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016-
03-01] 15 sequences; 16,411,463 total letters
Query= NC_002188.1
Length=288539
Score E
Sequences producing significant alignments: (Bits) Value
seq2 98.7 2e-15
>seq2
Length=2234776
Score = 98.7 bits (108), Expect = 2e-15
Identities = 126/174 (72%), Gaps = 0/174 (0%)
Strand=Plus/Plus
Query 135600 AGATAAAGACGAGTGGACTACGTGGaaaaaaaTACCCGATCCTGTTTTGCATATAGAACT 135659
||||||||||||||||||||| |||| | | ||||||||||| ||||| ||| |
Sbjct 1397855 AGATAAAGACGAGTGGACTACTTGGACAGCCCGTACAGATCCTGTTTTACATATTGAATT 1397914
Query 135660 TAGGAGATGGGCGGATGTTTTTATTATAGCGCCCTTAACGGCAAATACGTTAGCAAAAAT 135719
| || ||||| ||| | || | ||||| || |||| |||||||| || || ||
Sbjct 1397915 ACGCAGGTGGGCAGATATATTAGTGATAGCACCACTAACTGCAAATACTTTGAGTAAGAT 1397974
Query 135720 AGCTAATGGTATATGCGATAATTTACTGACGTCTATTGTAAGAGCCTGGGATAC 135773
||| |||| |||| |||||| || |||| | | || ||||| ||| ||||
Sbjct 1397975 AGCCCTTGGTTTATGTGATAATCTATTGACTAATGTGGTCAGAGCTTGGAATAC 1398028
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 923196626900600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |