Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016-
03-01] 15 sequences; 16,411,463 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq2 295 6e-75
>seq2
Length=2234776
Score = 295 bits (326), Expect = 6e-75
Identities = 588/860 (68%), Gaps = 21/860 (2%)
Strand=Plus/Minus
Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003
|||||||| ||| |||||||||||| |||||||| ||||| || | || || ||||||
Sbjct 2161570 TTTTGATAATCAGAAACTCTCTTTTCGAAGAAATTAGTTTTACCAGCCAAAGAGATATTT 2161511
Query 16004 TCCATAAAATCAAAAGGATTTTTTGAACAATAGTAT---TTATCGCATCCCAATTCCAAC 16060
||||| || ||||| ||||| ||| | | ||| || | | ||||| | |
Sbjct 2161510 TCCATGAAGTCAAATGGATTG---GAAGAGTTGTAAACCTTCTTGTTGCCCAAAGCAAGA 2161454
Query 16061 AATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATT 16120
| ||||||||| || |||||||| | |||||| ||| | | |||||||| |||| |
Sbjct 2161453 AGTAATCTATCTGCAACAAATTCAACATACTGACACATGAGCTTGCAGTTCATACCTAAT 2161394
Query 16121 AATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATT 16180
|| ||||| | || || || || | ||||| || | || |||||| | ||
Sbjct 2161393 AAAGAGACAGGCAAAGCATCGGTGAAGTAGCCCTTTTCGATTTCGACAGCTTCAGTAATG 2161334
Query 16181 ATATCTCTTACTACACTATTTAACGGAGGGTTTAAT----AAGTGTTTAAACATTATACA 16236
|| | || | ||| || | || ||| | | || || || | | ||
Sbjct 2161333 ATCT---TTTCAACAATAAC-AGCGTCAGGTCTGTTGTTCAAATGAGAGAATAACAAGCA 2161278
Query 16237 AGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACC 16296
|||||| ||| ||| || ||||| || || | || || ||||| || ||||| |||||
Sbjct 2161277 AGCAAAGTCAGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAGAATGTGAGACC 2161218
Query 16297 TGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATAT 16356
||||||| |||| || || | ||| || |||| ||||| || || || ||||| ||
Sbjct 2161217 AGGCATTAAACCTCTCTTCTTGAGCCAGAAGATAGAAGCAAACGAGCCCGAGAAGAAAAT 2161158
Query 16357 ACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTAC-GTTCTAtttttactttcta 16415
||||||||| || ||||| ||||| |||| ||||| || | || | | || |
Sbjct 2161157 ACCTTCAACAGCAGCAAAGGCAACTAATCTTTCACCAAACAATGCTTCATCGTCATT-GA 2161099
Query 16416 tccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAA 16475
||||| | |||||| | || |||||||| | || ||||| || || ||||| |
Sbjct 2161098 TCCATCGTAAAGCCCATTCAGCCTTTTGTTTGATGCATGGAATGTTTTCAATAGCATTGA 2161039
Query 16476 ATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTT 16535
||||||||| | ||| || | || ||||||||||| || ||||| || |||
Sbjct 2161038 ATAAATAATCTGCTTCCTTTGTGTCCTTGATATAAGTATCAATCAGTAAGGAGTAAGTTT 2160979
Query 16536 CTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTT 16595
| || || || || ||||| || || |||||||| ||||| | ||||| | | ||
Sbjct 2160978 CAGAGTGGATGTTTTCCATCATGATTTGGAAACCATAGAAGCACTTGGCTTCAGGAAGTT 2160919
Query 16596 GTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAA 16655
| ||||||| | || ||||| |||| ||||| ||||| || ||||| || ||||
Sbjct 2160918 GAACTTCAGCTGAGAAGTTTTCTACTAAATTTTCATTAACAATACCATCAGATGCAGCAA 2160859
Query 16656 AAAACGC-AAGTATGTGTTTAATAAAAtttttttCGTTATC--TGAAA-GTTTTAACCAG 16711
| || || ||| | | | ||||||| | |||| || || | ||| | ||| |||
Sbjct 2160858 AGAAAGCTAAGACTCT-TGAAATAAAAAATCTTTCATTGTCATTCAAACGGTTTTCCCAA 2160800
Query 16712 TCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTT 16771
||| || ||| ||| ||| || | ||||||| ||||||| || ||||| |||| ||
Sbjct 2160799 TCATGAACATCCTTTCCTAAGTCAATCTCTTCTGCAGTCCAGAAGGAAGCTTCAGCTTTC 2160740
Query 16772 TTATACATTTTCCATATGTC 16791
|||||||||| ||| || ||
Sbjct 2160739 TTATACATTTGCCAGATTTC 2160720
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462511913279000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |