Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016-
03-01] 15 sequences; 16,411,463 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq2 282 4e-71
>seq2
Length=2234776
Score = 282 bits (312), Expect = 4e-71
Identities = 598/887 (67%), Gaps = 13/887 (1%)
Strand=Plus/Minus
Query 13913 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13972
|||||||| ||| |||||| ||||| ||||| ||||||||||| ||| || ||||||
Sbjct 2161570 TTTTGATAATCAGAAACTCTCTTTTCGAAGAAATTAGTTTTACCAGCCAAAGAGATATTT 2161511
Query 13973 TCCATAAAATCAAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAGT 14032
||||| || ||||||||||| | || | | || || | || | | | |||
Sbjct 2161510 TCCATGAAGTCAAATGGATTGGAAGAGTTGTAAACCTTCTTGTTGCCCAAAGCAAGAAGT 2161451
Query 14033 AATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGT 14092
|||||||| |||| || |||| ||| ||| |||| | | || |||||||||| ||
Sbjct 2161450 AATCTATCTGCAACAAATTCAACATACTGACACATGAGCTTGCAGTTCATACCTAATAAA 2161391
Query 14093 TTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATA 14152
||||| | || ||| || | | ||||| || ||||| || | || ||
Sbjct 2161390 GAGACAGGCAAAGCATCGGTGAAGTAGCCCTTTTCGATTTCGACAGCTTCAGTAATGATC 2161331
Query 14153 ATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAA 14212
| || ||| || ||| | || | ||| || | || || |||||
Sbjct 2161330 TTTTCAACAATAACAGCGTCAGGTCTGTTGTTCAAATGAGAGAATAACAAGCAAGCAAAG 2161271
Query 14213 TCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATC 14272
||| ||| | || |||||||| | || | |||||| || ||||| | || |||||
Sbjct 2161270 TCAGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAGAATGTGAGACCAGGCATT 2161211
Query 14273 AATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCA 14332
|| |||| || || | ||| || || | ||| || || || || ||||| || || |||
Sbjct 2161210 AAACCTCTCTTCTTGAGCCAGAAGATAGAAGCAAACGAGCCCGAGAAGAAAATACCTTCA 2161151
Query 14333 ACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTT 14392
|| |||||||| || | ||||| ||| |||||| |||||| | || |||||| |
Sbjct 2161150 ACAGCAGCAAAGGCAACTAATCTTTCACCAAACAATGCTTCATCGTCATTGATCCATCGT 2161091
Query 14393 CTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATGT 14452
||||||||||| |||| ||| || | || ||||||||||||| |||||||
Sbjct 2161090 AAAGCCCATTCAGCCTTTTGTTTGATGCATGGAATGTTTTCAATAGCATTGAATAAATAA 2161031
Query 14453 TC--CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGT 14510
|| |||| || || |||| || || |||||||| |||||| || |||||||||
Sbjct 2161030 TCTGCTTCCTTTGTGTCCTTG--ATATAAGTATCAATCAGTAAGGAGTAAGTTTCAGAGT 2160973
Query 14511 GTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCT 14570
| ||||||||||| || || |||||||| || || | ||||| | ||| || |
Sbjct 2160972 GGATGTTTTCCATCATGATTTGGAAACCATAGAAGCACTTGGCTTCAGGAAGTTGAACTT 2160913
Query 14571 CTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATG 14630
| | | || |||| | |||||||||||||| ||||||||| || ||||| || |
Sbjct 2160912 CAGCTGAGAAGTTTTCTACTAAATTTTCATTAACAATACCATCAGATGCAGCAAAGAAAG 2160853
Query 14631 CCAATATGTTTTTAATAAAGTATTGCTCTTCATTG---CTGA---GTTTTTTCCAATCGG 14684
| || | || |||||| || || ||||||| | | | |||| ||||||
Sbjct 2160852 CTAAGACTCTTGAAATAAAAAAT--CT-TTCATTGTCATTCAAACGGTTTTCCCAATCAT 2160796
Query 14685 CTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTTTAT 14744
| |||||| | || | || || | ||||| || ||| ||||||| ||||
Sbjct 2160795 GAACATCCTTTCCTAAGTCAATCTCTTCTGCAGTCCAGAAGGAAGCTTCAGCTTTCTTAT 2160736
Query 14745 ACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCTT 14791
||||| ||| ||||| | |||| || || |||| |||||||||
Sbjct 2160735 ACATTTGCCAGATTTCATGATATTTAATTGGGAAAAGAACAAATCTT 2160689
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482345509560200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |