Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016- 03-01] 15 sequences; 16,411,463 total letters Query= NC_003038.1 Length=212482 Score E Sequences producing significant alignments: (Bits) Value seq7 123 3e-23 >seq7 Length=1328185 Score = 123 bits (136), Expect = 3e-23 Identities = 242/354 (68%), Gaps = 23/354 (6%) Strand=Plus/Plus Query 104524 CCTTGGGATAGAAGAATGATATTATTAGCTTGGAACCCAAAGGATAATTCTAAAATGGCA 104583 |||| ||||| ||||| || || |||||||||||||||||| | |||||||| Sbjct 1158075 CCTTATGATAGGAGAATTATTTTCAGTGCTTGGAACCCAAAGGATTTCCCAAAAATGGCT 1158134 Query 104584 CTTCCTCCTTGTCATTGTATAGCACATTTTGATGTAAG-TTCAAAAAT-----AAATGGT 104637 || || || |||||| | | || || || ||||||| | | ||| | | | Sbjct 1158135 CTACCCCCCTGTCATATTTTCGCTCAATTCTATGTAAGCTACCCTAATGGTCCTACTAAT 1158194 Query 104638 AAAAGAGAATTGTCTTGTCATTTATTTCAAAG-ATCTGCAGATATGGGGTTGGGAGTTCC 104696 ||| |||||||||| ||| |||| ||| | | |||| |||||||| || ||||| || Sbjct 1158195 AAAGGAGAATTGTCATGTGTATTATATCAGCGAAGCTGC-GATATGGGTTTAGGAGTACC 1158253 Query 104697 TTTTAACATAGCAAGTTATGCATTATTAACACATATAATAGCTCATGTCTCATCAACCAA 104756 ||||| |||||| ||||||| |||||||| | || || |||||||| | ||| Sbjct 1158254 ATTTAATATAGCATCTTATGCACTATTAACAAAAATGATCGCTCATGTTT------GCAA 1158307 Query 104757 TACAGAATTAATTGTTCCTGGAGATTTTGTTCACACATTAAGTAATGTTCATATTTATAA 104816 | | |||| |||||||||| |||| || ||| || ||| ||||| ||| Sbjct 1158308 T-----TTGGATTG----TGGAGATTTTATTCATACCTTAGGTGATGCCCATATATATTT 1158358 Query 104817 AAATCATATTAAAGCTCTTACAGAACAAATATCGAGAATTCCAAGAAAATTTCC 104870 | ||||| | |||| | | ||||| | ||||| || ||| | ||||| Sbjct 1158359 AGATCATGTGGAAGCCTTGAAGGAACAGTTGAAGAGAACCCCGAGAGAGTTTCC 1158412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 679814272534800