Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016- 03-01] 15 sequences; 16,411,463 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq1 93.3 3e-14 >seq1 Length=2480924 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| || | ||||||||| |||||||| |||||||| | | ||| | ||||| Sbjct 1873701 ACCAAATGTAATGTTGATTCCTTTTGAATATTGTAGTCCGATAGAGTTCGTCCGTCTTCT 1873642 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 ||||| || || ||| |||| |||||||| ||||| || | |||||||| || | Sbjct 1873641 AATTGCTTTCCAGCAAAGATGAGTCTTTGCTGATCTGGTGGAATACCTTCCTTGTCTTGA 1873582 Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296 || | |||||| | ||| |||||| | || ||| | |||||| |||| Sbjct 1873581 ATCTTACTCTTGACATTGTCAATAGTGTCTGATGATTCAACTTCTAATGTGATGGTTTTA 1873522 Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || ||||| || || || ||||||||||| Sbjct 1873521 CCAGTCAARGTCTTCACGAAAATTTGCAT 1873493 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| || | ||||||||| |||||||| |||||||| | | ||| | ||||| Sbjct 1873929 ACCAAATGTAATGTTGATTCCTTTTGAATATTGTAGTCCGATAGAGTTCGTCCGTCTTCT 1873870 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 ||||| || || ||| |||| |||||||| ||||| || | |||||||| || | Sbjct 1873869 AATTGCTTTCCAGCAAAGATGAGTCTTTGCTGATCTGGTGGAATACCTTCCTTGTCTTGA 1873810 Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296 || | |||||| | ||| |||||| | || ||| | |||||| |||| Sbjct 1873809 ATCTTACTCTTGACATTGTCAATAGTGTCTGATGATTCAACTTCTAATGTGATGGTTTTA 1873750 Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || ||||| || || || ||||||||||| Sbjct 1873749 CCAGTCAARGTCTTCACGAAAATTTGCAT 1873721 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| || | ||||||||| |||||||| |||||||| | | ||| | ||||| Sbjct 1874157 ACCAAATGTAATGTTGATTCCTTTTGAATATTGTAGTCCGATAGAGTTCGTCCGTCTTCT 1874098 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 ||||| || || ||| |||| |||||||| ||||| || | |||||||| || | Sbjct 1874097 AATTGCTTTCCAGCAAAGATGAGTCTTTGCTGATCTGGTGGAATACCTTCCTTGTCTTGA 1874038 Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296 || | |||||| | ||| |||||| | || ||| | |||||| |||| Sbjct 1874037 ATCTTACTCTTGACATTGTCAATAGTGTCTGATGATTCAACTTCTAATGTGATGGTTTTA 1873978 Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || ||||| || || || ||||||||||| Sbjct 1873977 CCAGTCAAGGTCTTCACGAAAATTTGCAT 1873949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379343930651175