Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016- 03-01] 15 sequences; 16,411,463 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq2 154 1e-32 seq5 123 2e-23 seq11 107 2e-18 seq4 89.7 5e-13 seq1 87.8 2e-12 >seq2 Length=2234776 Score = 154 bits (170), Expect = 1e-32 Identities = 578/895 (65%), Gaps = 31/895 (3%) Strand=Plus/Plus Query 57537 AGATTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAA 57596 |||||||| | || || ||| |||||| || || ||| | ||||| || || || ||| Sbjct 2160690 AGATTTGTTCTTTTCCCAATTAAATATCATGAAATCTGGCAAATGTATAAGAAAGCTGAA 2160749 Query 57597 GCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCC 57656 || || || ||||| | ||||| | ||| | |||||| | |||||||| | Sbjct 2160750 GCTTCCTTCTGGACTGCAGAAGAGATTGACTTAGGAAAGGATGTTCATGATTGGGAAAAC 2160809 Query 57657 C---TCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCC 57713 | | || || ||| ||| ||||||| | || || || || || || ||||| Sbjct 2160810 CGTTTGAATGACAATGAAAGATTTTTTATTTCAAGAGTCTTAGCTTTCTTTGCTGCATCT 2160869 Query 57714 GATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAG 57773 |||||||||||||| || ||||| || |||| || ||| ||||| ||| | | || Sbjct 2160870 GATGGTATTGTTAATGAAAATTTAGTAGAAAACTTCTCAGCTGAAGTTCAACTTCCTGAA 2160929 Query 57774 GCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCG 57833 || | ||||| || || || ||| | || |||||| | || || |||| || || Sbjct 2160930 GCCAAGTGCTTCTATGGTTTCCAAATCATGATGGAAAACATCCACTCTGAAACTTACTCC 2160989 Query 57834 CTACTCATCGATACGTACGTGAAGGACAACGACGAGAAACGTAGA----CTGTTCAACGC 57889 |||| || ||||| || | |||||| || | | ||| | ||| | ||||| || Sbjct 2160990 TTACTGATTGATACTTATATCAAGGAC-ACAAAG-GAA--GCAGATTATTTATTCAATGC 2161045 Query 57890 GATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAG 57949 || |||| || || ||| | ||||| || ||| | | |||||| || Sbjct 2161046 TATTGAAAACATTCCATGCATCAAACAAAAGGCTGAATGGGCTTTACGATGGATCAATGA 2161105 Query 57950 CGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTT 58009 || || ||| | || || || | || || || || || |||||||| ||||| Sbjct 2161106 CGATGAAGCATTGTTTGGTGAAAGATTAGTTGCCTTTGCTGCTGTTGAAGGTATTTTCTT 2161165 Query 58010 TTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGAC 58069 |||||| ||||| | || || ||| | ||||| | || | ||||| || || || Sbjct 2161166 CTCGGGCTCGTTTGCTTCTATCTTCTGGCTCAAGAAGAGAGGTTTAATGCCTGGTCTCAC 2161225 Query 58070 GTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAAT 58129 || ||||| ||||| | | || || ||| | |||||||| ||||| ||| | | Sbjct 2161226 ATTCTCTAACGAATTGATCTGCAGAGATGAAGGTTTACATACTGACTTTGCTTGCTTGTT 2161285 Query 58130 GTACTCTCACATTGTCAATAAACC-GACGC-GGGATCGCATCTTG--GACATTATCACCG 58185 | |||||| | ||| | ||| ||||| | || | ||| | || || || | Sbjct 2161286 ATTCTCTCATTTGAACAACAGACCTGACGCTGTTAT----TGTTGAAAAGATCATTACTG 2161341 Query 58186 AGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTA 58245 | || |||| |||||||| | | ||||||| || | || || | | | |||| Sbjct 2161342 AAGCTGTCGAAATCGAAAAGGGCTACTTCACCGATGCTTTGCCTGTCTCTTTATTAGGTA 2161401 Query 58246 TGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAAC 58305 ||||| | | |||| |||| |||| |||||||| || ||| | | || | | Sbjct 2161402 TGAACTGCAAGCTCATGTGTCAGTATGTTGAATTTGTTGCAGATAGATTACTTCTTG--C 2161459 Query 58306 TGATTGG------AGAGCGTCATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGA 58359 | |||| ||| || ||||||| | ||||| ||||| || ||| | | Sbjct 2161460 T--TTGGGCAACAAGAAGGT--TTACAACTCTTCCAATCCATTTGACTTCATGGAAAATA 2161515 Query 58360 TCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAA 58414 |||| | | || || || || || |||||||| | |||| || |||||||| Sbjct 2161516 TCTCTTTGGCTGGTAAAACTAATTTCTTCGAAAAGAGAGTTTCTGATTATCAAAA 2161570 >seq5 Length=1485630 Score = 123 bits (136), Expect = 2e-23 Identities = 377/579 (65%), Gaps = 8/579 (1%) Strand=Plus/Minus Query 23405 TCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGC 23464 || ||||| ||| |||||| ||| || | || || || | || | |||||| || Sbjct 766334 TCTTCTTTTCCGTGATTCTTTCTCACGTCAATGAAATCAAAGATATCAGGATGCCAAGGT 766275 Query 23465 TCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCC 23524 || | ||| | || || || || || | ||||| || || || || || || | || Sbjct 766274 TCTAAGTATAAAGCGAAAGCACCAGGGCGTTTATTACCACCTTGGTCCACATATCTAGCA 766215 Query 23525 GTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCC 23584 ||||||||| | || | | ||| || | | ||| || || | ||| || || Sbjct 766214 GTGTTGTTGAAAACACGCATCATGGGGATAATACCATTAGATGTTCCGTTAGTACCAGCA 766155 Query 23585 ACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTC 23644 | | ||||| ||| || || || || | || ||||| || || || | | || Sbjct 766154 ATATAAGAACCAGTTGATCTAATATTATGGATATGTAAACCAATACCACCAGCAGTCTTG 766095 Query 23645 GATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTC 23704 || |||| || ||| ||| ||||| ||||| ||||| || || || || || | Sbjct 766094 GAAATCAATGCACATGTTTTAAGAGTATCGTAAATGCCTTCAATTGAATCTTCCTTCATG 766035 Query 23705 GCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGG 23764 || ||||||||||| ||||||||||| | || || ||| | || |||| || || Sbjct 766034 GCAACCAAGAAACAAGAAGACATTTGAGGTTGAGGTGTACCAGCATTAAACAAAGTAGGT 765975 Query 23765 CTGGCGTGCGTAAAGTA-TCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAAT 23823 || || || || || | || ||||| | ||| || || | ||| | |||||| Sbjct 765974 GATGCATGAGTGAAATACTTCA-AAGACATCAAATTATAAGTTTTGATAACATTATCAAT 765916 Query 23824 GTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCT---CGAC 23880 ||| || || || ||||| | || || | ||| ||||||| || ||||| | |||| Sbjct 765915 GTCATCGCCATGAATACCAACAGCAACTCTCATAATCATGTGCTGGGGTCTTTCAGCGAC 765856 Query 23881 CGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTC 23940 | ||| | | | | || | ||| || || | | ||||| || ||||| || | Sbjct 765855 TTT---GCCATCTACTCTTAATAAATAAGATCGCTCTAATGTTTTGAAACCAAAGTAATT 765799 Query 23941 ATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAA 23979 |||||| || || || || | || || ||||||||||| Sbjct 765798 ATAGTTGAAATCGCGTTCATAAACAATAGCCGAATTCAA 765760 >seq11 Length=408711 Score = 107 bits (118), Expect = 2e-18 Identities = 341/528 (65%), Gaps = 18/528 (3%) Strand=Plus/Plus Query 23035 ATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCT 23094 ||||||||| || || ||| |||| ||||| |||||||| |||||||| Sbjct 180530 ATTGCATACAGCTGTTTCCTCTGGTGACGAGTACTGAACAATTTCACAGCATAGATTAGA 180589 Query 23095 ACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAG 23154 | || || || || | ||| ||||||| ||| | ||| || |||||||| || || Sbjct 180590 TGATTTGATAGTTCCGAGATTCTTCTGGTTTGATTTACTATTACAAGAATCCTTATAAAG 180649 Query 23155 CATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGC 23214 |||| | || || ||||| || || || || | || |||| | |||| || Sbjct 180650 CATGAAAGGTCCTCCAGTCTCTACTTGAGATTCAAGTATACTGTGCCATAATTTCTGGGC 180709 Query 23215 GTGAACACGTCGCACGTACCTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTC 23274 | ||| || | |||| ||||| | |||| || |||| | |||||||| Sbjct 180710 CTTCACAACTCTCGTAAACCTCCCTTCAGCAACGTATTTCGTATACAGCTTTTCAAATTC 180769 Query 23275 GGCAC----CGTAACAGTCGGCCAGGCCGGGCGATTGCATCGG-----ACACATGAGACT 23325 ||| |||| ||||| || || ||||| | | || | | ||| | | Sbjct 180770 CTCACTACACGTA----TCGGCAAGTCCAGGCGAATCAACAGGTGAAAATAAATGCCAGT 180825 Query 23326 CCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAA 23385 | ||||| ||||||| ||||||| || || |||||||||| || ||||| Sbjct 180826 CATCATTGC-----TTTCAACTTTCTTCATAAATAGGTCGGGTATCCATAATGCATAGAA 180880 Query 23386 CAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAA 23445 || || || || | | ||| ||||| || || ||| | || || | || || || Sbjct 180881 GAGGTCACGAGCTCTTAACTCTTCTTTACCATGATTTTTTCTTAAGTCAAGGAATTCGAA 180940 Query 23446 CACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCC 23505 | || |||||| || || ||||| | ||||| ||||||||||| || || || || Sbjct 180941 TATATCATTATGCCATGGTTCAAGGTATATTGCAAAAGCGCCCGGTCTTTTGTTTCCCCC 181000 Query 23506 CTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCAC 23553 ||||| ||||| | || ||||| ||| | |||| | ||| || || Sbjct 181001 TTGATCAACGTATCTAGCAGTGTTATTGAAAACTCGCAACATGGGAAC 181048 >seq4 Length=1903616 Score = 89.7 bits (98), Expect = 5e-13 Identities = 153/221 (69%), Gaps = 1/221 (0%) Strand=Plus/Minus Query 31186 ATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGA 31245 ||||| ||||||||||||||| ||||| || || || || || || || |||| ||||| Sbjct 1735491 ATCAATCATGCAAATTTTCGTTAAGACCCTTACGGGTAAGACTATTACTCTCGAGGTTGA 1735432 Query 31246 ACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCC 31305 | || |||| | || | ||||| | || ||||| ||||| | || || Sbjct 1735431 GTCTTCAGACACCATTGACAATGTCAAGTCTAAGATTCAAGACAAAGAAGGAATTCCTCC 1735372 Query 31306 CGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGA 31365 || || || ||| | || || ||||| || ||||||||||| | || | || Sbjct 1735371 AGATCAACAACGTTTGATCTTTGCTGGTAAGCAGTTGGAAGATGGAAGAACCCTTTCTGA 1735312 Query 31366 TTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTA 31406 || ||||| ||||| |||||||| || ||| |||| |||| Sbjct 1735311 CTACAACATCCAAAAGGAATCGACCCTCCATTTGGT-CTTA 1735272 >seq1 Length=2480924 Score = 87.8 bits (96), Expect = 2e-12 Identities = 140/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260 ||| || ||||| | || || || || || ||| | || |||||| | ||||||| | | Sbjct 1632911 TTTTGTTAAGACCTTAACTGGTAAGACTATTACCTTGGAAGTTGAATCTTCCGACACTAT 1632852 Query 31261 CGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320 || | |||||| | || ||||||||||| | || || || || |||||| | Sbjct 1632851 TGACAATGTCAAAAGCAAGATTCAAGACAAGGAAGGAATTCCACCAGATCAACAGCGTTT 1632792 Query 31321 AATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380 || || ||||| || || || |||||| | ||| || || || ||||||||||| Sbjct 1632791 GATCTTTGCTGGTAAGCAATTAGAAGACGGAAGAACTTTGTCTGACTACAACATTCAAAA 1632732 Query 31381 AGAATCGACTCTTCATCTGGT 31401 || || ||||| ||| |||| Sbjct 1632731 GGAGTCTACTCTCCATTTGGT 1632711 Score = 86.0 bits (94), Expect = 6e-12 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| ||||| |||| || ||||| ||||| | || |||||| | || Sbjct 1873493 ATGCAAATTTTCGTGAAGACYTTGACTGGTAAAACCATCACATTAGAAGTTGAATCATCA 1873552 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | || | ||||| | || ||||||||||| | || || || ||| Sbjct 1873553 GACACTATTGACAATGTCAAGAGTAAGATTCAAGACAAGGAAGGTATTCCACCAGATCAG 1873612 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | || || || ||||| || || || |||||| ||| | || || || Sbjct 1873613 CAAAGACTCATCTTTGCTGGAAAGCAATTAGAAGACGGACGAACTCTATCGGACTACAAT 1873672 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGT 31401 |||||||| ||||| || | ||| |||| Sbjct 1873673 ATTCAAAAGGAATCAACATTACATTTGGT 1873701 Score = 86.0 bits (94), Expect = 6e-12 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| ||||| |||| || ||||| ||||| | || |||||| | || Sbjct 1873721 ATGCAAATTTTCGTGAAGACYTTGACTGGTAAAACCATCACATTAGAAGTTGAATCATCA 1873780 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | || | ||||| | || ||||||||||| | || || || ||| Sbjct 1873781 GACACTATTGACAATGTCAAGAGTAAGATTCAAGACAAGGAAGGTATTCCACCAGATCAG 1873840 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | || || || ||||| || || || |||||| ||| | || || || Sbjct 1873841 CAAAGACTCATCTTTGCTGGAAAGCAATTAGAAGACGGACGAACTCTATCGGACTACAAT 1873900 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGT 31401 |||||||| ||||| || | ||| |||| Sbjct 1873901 ATTCAAAAGGAATCAACATTACATTTGGT 1873929 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| ||||| |||| || ||||| ||||| | || |||||| | || Sbjct 1873949 ATGCAAATTTTCGTGAAGACCTTGACTGGTAAAACCATCACATTAGAAGTTGAATCATCA 1874008 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | || | ||||| | || ||||||||||| | || || || ||| Sbjct 1874009 GACACTATTGACAATGTCAAGAGTAAGATTCAAGACAAGGAAGGTATTCCACCAGATCAG 1874068 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | || || || ||||| || || || |||||| ||| | || || || Sbjct 1874069 CAAAGACTCATCTTTGCTGGAAAGCAATTAGAAGACGGACGAACTCTATCGGACTACAAT 1874128 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGT 31401 |||||||| ||||| || | ||| |||| Sbjct 1874129 ATTCAAAAGGAATCAACATTACATTTGGT 1874157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766316418800