Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016-
03-01] 15 sequences; 16,411,463 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq2 154 1e-32
seq5 123 2e-23
seq11 107 2e-18
seq4 89.7 5e-13
seq1 87.8 2e-12
>seq2
Length=2234776
Score = 154 bits (170), Expect = 1e-32
Identities = 578/895 (65%), Gaps = 31/895 (3%)
Strand=Plus/Plus
Query 57537 AGATTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAA 57596
|||||||| | || || ||| |||||| || || ||| | ||||| || || || |||
Sbjct 2160690 AGATTTGTTCTTTTCCCAATTAAATATCATGAAATCTGGCAAATGTATAAGAAAGCTGAA 2160749
Query 57597 GCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCC 57656
|| || || ||||| | ||||| | ||| | |||||| | |||||||| |
Sbjct 2160750 GCTTCCTTCTGGACTGCAGAAGAGATTGACTTAGGAAAGGATGTTCATGATTGGGAAAAC 2160809
Query 57657 C---TCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCC 57713
| | || || ||| ||| ||||||| | || || || || || || |||||
Sbjct 2160810 CGTTTGAATGACAATGAAAGATTTTTTATTTCAAGAGTCTTAGCTTTCTTTGCTGCATCT 2160869
Query 57714 GATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAG 57773
|||||||||||||| || ||||| || |||| || ||| ||||| ||| | | ||
Sbjct 2160870 GATGGTATTGTTAATGAAAATTTAGTAGAAAACTTCTCAGCTGAAGTTCAACTTCCTGAA 2160929
Query 57774 GCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCG 57833
|| | ||||| || || || ||| | || |||||| | || || |||| || ||
Sbjct 2160930 GCCAAGTGCTTCTATGGTTTCCAAATCATGATGGAAAACATCCACTCTGAAACTTACTCC 2160989
Query 57834 CTACTCATCGATACGTACGTGAAGGACAACGACGAGAAACGTAGA----CTGTTCAACGC 57889
|||| || ||||| || | |||||| || | | ||| | ||| | ||||| ||
Sbjct 2160990 TTACTGATTGATACTTATATCAAGGAC-ACAAAG-GAA--GCAGATTATTTATTCAATGC 2161045
Query 57890 GATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAG 57949
|| |||| || || ||| | ||||| || ||| | | |||||| ||
Sbjct 2161046 TATTGAAAACATTCCATGCATCAAACAAAAGGCTGAATGGGCTTTACGATGGATCAATGA 2161105
Query 57950 CGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTT 58009
|| || ||| | || || || | || || || || || |||||||| |||||
Sbjct 2161106 CGATGAAGCATTGTTTGGTGAAAGATTAGTTGCCTTTGCTGCTGTTGAAGGTATTTTCTT 2161165
Query 58010 TTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGAC 58069
|||||| ||||| | || || ||| | ||||| | || | ||||| || || ||
Sbjct 2161166 CTCGGGCTCGTTTGCTTCTATCTTCTGGCTCAAGAAGAGAGGTTTAATGCCTGGTCTCAC 2161225
Query 58070 GTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAAT 58129
|| ||||| ||||| | | || || ||| | |||||||| ||||| ||| | |
Sbjct 2161226 ATTCTCTAACGAATTGATCTGCAGAGATGAAGGTTTACATACTGACTTTGCTTGCTTGTT 2161285
Query 58130 GTACTCTCACATTGTCAATAAACC-GACGC-GGGATCGCATCTTG--GACATTATCACCG 58185
| |||||| | ||| | ||| ||||| | || | ||| | || || || |
Sbjct 2161286 ATTCTCTCATTTGAACAACAGACCTGACGCTGTTAT----TGTTGAAAAGATCATTACTG 2161341
Query 58186 AGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTA 58245
| || |||| |||||||| | | ||||||| || | || || | | | ||||
Sbjct 2161342 AAGCTGTCGAAATCGAAAAGGGCTACTTCACCGATGCTTTGCCTGTCTCTTTATTAGGTA 2161401
Query 58246 TGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAAC 58305
||||| | | |||| |||| |||| |||||||| || ||| | | || | |
Sbjct 2161402 TGAACTGCAAGCTCATGTGTCAGTATGTTGAATTTGTTGCAGATAGATTACTTCTTG--C 2161459
Query 58306 TGATTGG------AGAGCGTCATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGA 58359
| |||| ||| || ||||||| | ||||| ||||| || ||| | |
Sbjct 2161460 T--TTGGGCAACAAGAAGGT--TTACAACTCTTCCAATCCATTTGACTTCATGGAAAATA 2161515
Query 58360 TCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAA 58414
|||| | | || || || || || |||||||| | |||| || ||||||||
Sbjct 2161516 TCTCTTTGGCTGGTAAAACTAATTTCTTCGAAAAGAGAGTTTCTGATTATCAAAA 2161570
>seq5
Length=1485630
Score = 123 bits (136), Expect = 2e-23
Identities = 377/579 (65%), Gaps = 8/579 (1%)
Strand=Plus/Minus
Query 23405 TCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGC 23464
|| ||||| ||| |||||| ||| || | || || || | || | |||||| ||
Sbjct 766334 TCTTCTTTTCCGTGATTCTTTCTCACGTCAATGAAATCAAAGATATCAGGATGCCAAGGT 766275
Query 23465 TCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCC 23524
|| | ||| | || || || || || | ||||| || || || || || || | ||
Sbjct 766274 TCTAAGTATAAAGCGAAAGCACCAGGGCGTTTATTACCACCTTGGTCCACATATCTAGCA 766215
Query 23525 GTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCC 23584
||||||||| | || | | ||| || | | ||| || || | ||| || ||
Sbjct 766214 GTGTTGTTGAAAACACGCATCATGGGGATAATACCATTAGATGTTCCGTTAGTACCAGCA 766155
Query 23585 ACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTC 23644
| | ||||| ||| || || || || | || ||||| || || || | | ||
Sbjct 766154 ATATAAGAACCAGTTGATCTAATATTATGGATATGTAAACCAATACCACCAGCAGTCTTG 766095
Query 23645 GATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTC 23704
|| |||| || ||| ||| ||||| ||||| ||||| || || || || || |
Sbjct 766094 GAAATCAATGCACATGTTTTAAGAGTATCGTAAATGCCTTCAATTGAATCTTCCTTCATG 766035
Query 23705 GCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGG 23764
|| ||||||||||| ||||||||||| | || || ||| | || |||| || ||
Sbjct 766034 GCAACCAAGAAACAAGAAGACATTTGAGGTTGAGGTGTACCAGCATTAAACAAAGTAGGT 765975
Query 23765 CTGGCGTGCGTAAAGTA-TCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAAT 23823
|| || || || || | || ||||| | ||| || || | ||| | ||||||
Sbjct 765974 GATGCATGAGTGAAATACTTCA-AAGACATCAAATTATAAGTTTTGATAACATTATCAAT 765916
Query 23824 GTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCT---CGAC 23880
||| || || || ||||| | || || | ||| ||||||| || ||||| | ||||
Sbjct 765915 GTCATCGCCATGAATACCAACAGCAACTCTCATAATCATGTGCTGGGGTCTTTCAGCGAC 765856
Query 23881 CGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTC 23940
| ||| | | | | || | ||| || || | | ||||| || ||||| || |
Sbjct 765855 TTT---GCCATCTACTCTTAATAAATAAGATCGCTCTAATGTTTTGAAACCAAAGTAATT 765799
Query 23941 ATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAA 23979
|||||| || || || || | || || |||||||||||
Sbjct 765798 ATAGTTGAAATCGCGTTCATAAACAATAGCCGAATTCAA 765760
>seq11
Length=408711
Score = 107 bits (118), Expect = 2e-18
Identities = 341/528 (65%), Gaps = 18/528 (3%)
Strand=Plus/Plus
Query 23035 ATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCT 23094
||||||||| || || ||| |||| ||||| |||||||| ||||||||
Sbjct 180530 ATTGCATACAGCTGTTTCCTCTGGTGACGAGTACTGAACAATTTCACAGCATAGATTAGA 180589
Query 23095 ACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAG 23154
| || || || || | ||| ||||||| ||| | ||| || |||||||| || ||
Sbjct 180590 TGATTTGATAGTTCCGAGATTCTTCTGGTTTGATTTACTATTACAAGAATCCTTATAAAG 180649
Query 23155 CATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGC 23214
|||| | || || ||||| || || || || | || |||| | |||| ||
Sbjct 180650 CATGAAAGGTCCTCCAGTCTCTACTTGAGATTCAAGTATACTGTGCCATAATTTCTGGGC 180709
Query 23215 GTGAACACGTCGCACGTACCTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTC 23274
| ||| || | |||| ||||| | |||| || |||| | ||||||||
Sbjct 180710 CTTCACAACTCTCGTAAACCTCCCTTCAGCAACGTATTTCGTATACAGCTTTTCAAATTC 180769
Query 23275 GGCAC----CGTAACAGTCGGCCAGGCCGGGCGATTGCATCGG-----ACACATGAGACT 23325
||| |||| ||||| || || ||||| | | || | | ||| | |
Sbjct 180770 CTCACTACACGTA----TCGGCAAGTCCAGGCGAATCAACAGGTGAAAATAAATGCCAGT 180825
Query 23326 CCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAA 23385
| ||||| ||||||| ||||||| || || |||||||||| || |||||
Sbjct 180826 CATCATTGC-----TTTCAACTTTCTTCATAAATAGGTCGGGTATCCATAATGCATAGAA 180880
Query 23386 CAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAA 23445
|| || || || | | ||| ||||| || || ||| | || || | || || ||
Sbjct 180881 GAGGTCACGAGCTCTTAACTCTTCTTTACCATGATTTTTTCTTAAGTCAAGGAATTCGAA 180940
Query 23446 CACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCC 23505
| || |||||| || || ||||| | ||||| ||||||||||| || || || ||
Sbjct 180941 TATATCATTATGCCATGGTTCAAGGTATATTGCAAAAGCGCCCGGTCTTTTGTTTCCCCC 181000
Query 23506 CTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCAC 23553
||||| ||||| | || ||||| ||| | |||| | ||| || ||
Sbjct 181001 TTGATCAACGTATCTAGCAGTGTTATTGAAAACTCGCAACATGGGAAC 181048
>seq4
Length=1903616
Score = 89.7 bits (98), Expect = 5e-13
Identities = 153/221 (69%), Gaps = 1/221 (0%)
Strand=Plus/Minus
Query 31186 ATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGA 31245
||||| ||||||||||||||| ||||| || || || || || || || |||| |||||
Sbjct 1735491 ATCAATCATGCAAATTTTCGTTAAGACCCTTACGGGTAAGACTATTACTCTCGAGGTTGA 1735432
Query 31246 ACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCC 31305
| || |||| | || | ||||| | || ||||| ||||| | || ||
Sbjct 1735431 GTCTTCAGACACCATTGACAATGTCAAGTCTAAGATTCAAGACAAAGAAGGAATTCCTCC 1735372
Query 31306 CGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGA 31365
|| || || ||| | || || ||||| || ||||||||||| | || | ||
Sbjct 1735371 AGATCAACAACGTTTGATCTTTGCTGGTAAGCAGTTGGAAGATGGAAGAACCCTTTCTGA 1735312
Query 31366 TTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTA 31406
|| ||||| ||||| |||||||| || ||| |||| ||||
Sbjct 1735311 CTACAACATCCAAAAGGAATCGACCCTCCATTTGGT-CTTA 1735272
>seq1
Length=2480924
Score = 87.8 bits (96), Expect = 2e-12
Identities = 140/201 (70%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260
||| || ||||| | || || || || || ||| | || |||||| | ||||||| | |
Sbjct 1632911 TTTTGTTAAGACCTTAACTGGTAAGACTATTACCTTGGAAGTTGAATCTTCCGACACTAT 1632852
Query 31261 CGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320
|| | |||||| | || ||||||||||| | || || || || |||||| |
Sbjct 1632851 TGACAATGTCAAAAGCAAGATTCAAGACAAGGAAGGAATTCCACCAGATCAACAGCGTTT 1632792
Query 31321 AATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380
|| || ||||| || || || |||||| | ||| || || || |||||||||||
Sbjct 1632791 GATCTTTGCTGGTAAGCAATTAGAAGACGGAAGAACTTTGTCTGACTACAACATTCAAAA 1632732
Query 31381 AGAATCGACTCTTCATCTGGT 31401
|| || ||||| ||| ||||
Sbjct 1632731 GGAGTCTACTCTCCATTTGGT 1632711
Score = 86.0 bits (94), Expect = 6e-12
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||||||||| ||||| |||| || ||||| ||||| | || |||||| | ||
Sbjct 1873493 ATGCAAATTTTCGTGAAGACYTTGACTGGTAAAACCATCACATTAGAAGTTGAATCATCA 1873552
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | | || | ||||| | || ||||||||||| | || || || |||
Sbjct 1873553 GACACTATTGACAATGTCAAGAGTAAGATTCAAGACAAGGAAGGTATTCCACCAGATCAG 1873612
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| | || || || ||||| || || || |||||| ||| | || || ||
Sbjct 1873613 CAAAGACTCATCTTTGCTGGAAAGCAATTAGAAGACGGACGAACTCTATCGGACTACAAT 1873672
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGT 31401
|||||||| ||||| || | ||| ||||
Sbjct 1873673 ATTCAAAAGGAATCAACATTACATTTGGT 1873701
Score = 86.0 bits (94), Expect = 6e-12
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||||||||| ||||| |||| || ||||| ||||| | || |||||| | ||
Sbjct 1873721 ATGCAAATTTTCGTGAAGACYTTGACTGGTAAAACCATCACATTAGAAGTTGAATCATCA 1873780
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | | || | ||||| | || ||||||||||| | || || || |||
Sbjct 1873781 GACACTATTGACAATGTCAAGAGTAAGATTCAAGACAAGGAAGGTATTCCACCAGATCAG 1873840
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| | || || || ||||| || || || |||||| ||| | || || ||
Sbjct 1873841 CAAAGACTCATCTTTGCTGGAAAGCAATTAGAAGACGGACGAACTCTATCGGACTACAAT 1873900
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGT 31401
|||||||| ||||| || | ||| ||||
Sbjct 1873901 ATTCAAAAGGAATCAACATTACATTTGGT 1873929
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||||||||| ||||| |||| || ||||| ||||| | || |||||| | ||
Sbjct 1873949 ATGCAAATTTTCGTGAAGACCTTGACTGGTAAAACCATCACATTAGAAGTTGAATCATCA 1874008
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | | || | ||||| | || ||||||||||| | || || || |||
Sbjct 1874009 GACACTATTGACAATGTCAAGAGTAAGATTCAAGACAAGGAAGGTATTCCACCAGATCAG 1874068
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| | || || || ||||| || || || |||||| ||| | || || ||
Sbjct 1874069 CAAAGACTCATCTTTGCTGGAAAGCAATTAGAAGACGGACGAACTCTATCGGACTACAAT 1874128
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGT 31401
|||||||| ||||| || | ||| ||||
Sbjct 1874129 ATTCAAAAGGAATCAACATTACATTTGGT 1874157
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445766316418800
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