Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016-
03-01] 15 sequences; 16,411,463 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq7 123 5e-23
seq2 123 5e-23
seq5 93.3 8e-14
>seq7
Length=1328185
Score = 123 bits (136), Expect = 5e-23
Identities = 379/578 (66%), Gaps = 36/578 (6%)
Strand=Plus/Plus
Query 35153 GATAGAACTGGAACAGGAACTCTATCCATTTTTGGACCCC---AAATGAGGTTCTCTCTT 35209
|||||||| |||||||| || |||| | || | ||| | | |||| ||| |||
Sbjct 1157700 GATAGAACAGGAACAGGCACATTATCGTTATTCGCACCTCCGCAGTTGAGATTCAGCCTT 1157759
Query 35210 CGAGACGAC-ACTATTCCAGTTCTCACTACCAAGAAAAT-TTTCTGGAGAGGAGTTGTGG 35267
|| | ||| ||| |||| | || || || || || | |||||| | |||| || ||
Sbjct 1157760 AGAAATGACGACT-TTCCGTTGCTGACGACAAAAAAGGTGTTTCTGAA-AGGAATTTTGC 1157817
Query 35268 AAGAACTCTCGTGGTTCATCAGGGGCAATACAGACGCCAAAGAATTGGCCAAGAAGAAGA 35327
|||||| |||||||| ||| |||| |||||||| | || | ||||
Sbjct 1157818 TAGAACTACTATGGTTCATTGCTGGCGATACCAACGCCAAACATTTATCTGAGAAAGGTG 1157877
Query 35328 TACACATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGATA 35387
|| | || ||| | | |||||| | |||||| |||| | | ||| | | |||
Sbjct 1157878 TAAAAATATGGGATGGTAATGGAAGCAGAGAATTTCTGGATAAAATCGGGCTGAAAGATC 1157937
Query 35388 GAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAAT 35447
| |||||||| || || || || || || || |||||||||||||||||||||||||
Sbjct 1157938 GTCGTGAGGGAGACTTAGGGCCTGTTTATGGGTTTCAATGGCGTCATTTTGGTGCTGAAT 1157997
Query 35448 AT---GATACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATAT-A 35503
|| ||| || |||| || || || || || |||||||||| || || | |
Sbjct 1157998 ATACGGAT---TGCGACGCCGACTACACAGGCAAAGGCGTTGATCAATTAGCTGATGTCA 1158054
Query 35504 CTAAAGACCCTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCT 35563
| | | | | ||| ||||| ||||||| || || ||| | | || ||||| ||
Sbjct 1158055 TTCATAAGCTTAAGA-CTAATCCTTATGATAGGAGAATTATTTTCAGTGCTTGGAACCCA 1158113
Query 35564 ATGGATCTTCACCTTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATG----- 35618
| |||| | | |||||||| || || || || || |||||||| ||||
Sbjct 1158114 AAGGATTTCCCAAAAATGGCTCTACCCCCCTGTCATATTTTCGCTCAATTCTATGTAAGC 1158173
Query 35619 --------TGG-----CTAAT---GGAGAATTGTCGTGCCAGTTGTATCAGCGAAGCGGA 35662
||| ||||| ||||||||||| || || |||||||||||| |
Sbjct 1158174 TACCCTAATGGTCCTACTAATAAAGGAGAATTGTCATGTGTATTATATCAGCGAAGCTGC 1158233
Query 35663 GATGTCGGGTTGGGCGTGCCCTTCAATATTGCATCATA 35700
||| | || || || || || || ||||| ||||| ||
Sbjct 1158234 GATATGGGTTTAGGAGTACCATTTAATATAGCATCTTA 1158271
>seq2
Length=2234776
Score = 123 bits (136), Expect = 5e-23
Identities = 557/861 (65%), Gaps = 35/861 (4%)
Strand=Plus/Plus
Query 101514 TCTGGGAAATGTACAAAAAAGAGGTTGCCTGTTTTTGGACATTGGAAGAGATTGATTTCG 101573
||||| ||||||| || |||| | || | || ||||| ||||||||||| || |
Sbjct 2160724 TCTGGCAAATGTATAAGAAAGCTGAAGCTTCCTTCTGGACTGCAGAAGAGATTGACTTAG 2160783
Query 101574 AAAGGGATCCTAAAGATTGGGAGAAAC---TCACTCAAGATGAGAAGGATTTCATTCTCC 101630
|| |||| | | |||||||| || | | | | | |||| | ||| ||| ||
Sbjct 2160784 GAAAGGATGTTCATGATTGGGAAAACCGTTTGAATGACAATGAAAGATTTTTTATT-TCA 2160842
Query 101631 AGATTCTG-GCGTTCTTTGCATCCTCTGACGGAATTGTAATTGAAAATCT--TACAACAC 101687
||| ||| || |||||||| | ||||| || ||||| | ||||||| | || || ||
Sbjct 2160843 AGAGTCTTAGCTTTCTTTGCTGCATCTGATGGTATTGTTAATGAAAATTTAGTAGAAAAC 2160902
Query 101688 GTCTTCG-TCAAGTGGCGCAGATTCCAGAAGCGAGGAGTTTCTTTGACTTCCAAGTTGGA 101746
||| | | |||| || |||| ||||| | | | |||| || |||||| |
Sbjct 2160903 TTCTCAGCTGAAGTT---CAACTTCCTGAAGCCAAGTGCTTCTATGGTTTCCAAATCATG 2160959
Query 101747 ATGGAGAGTATTCA-TGGCAACGTCTACGGAGAACTGATTGATAGACTGGTGCCC--GAC 101803
||||| | || || | || | ||| ||||||||||| || | | |||
Sbjct 2160960 ATGGAAAACATCCACTCTGAAACT-TACTCCTTACTGATTGATA--CTTATATCAAGGAC 2161016
Query 101804 GAAAAAGACA-AGGCTATCTTGTTTAACGCTGCACAACACTTCCCCGCCATCAAGAAGAA 101862
||| || || ||| || || || ||| || || | || |||||| | ||
Sbjct 2161017 ACAAAGGAAGCAGATTAT-TTATTCAATGCTATTGAAAACATTCCATGCATCAAACAAAA 2161075
Query 101863 GGAGCAGTGGGCTATTAATTGGATGCAAAG-CAATAACGATTTG---GCGGAACTAATTG 101918
|| | |||||| | ||||| ||| | | || | | ||| | ||| | | |
Sbjct 2161076 GGCTGAATGGGCTTTACGATGGAT-CAATGACGATGAAGCATTGTTTGGTGAAAGATTAG 2161134
Query 101919 TTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGA 101978
||||||||||||| |||||||| || ||||| || | || || || || ||||||
Sbjct 2161135 TTGCCTTTGCTGCTGTTGAAGGTATTTTCTTCTCGGGCTCGTTTGCTTCTATCTTCTGGC 2161194
Query 101979 TCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACG 102038
||||||| || ||| | ||||||||||||| | ||| || || || || | || || |
Sbjct 2161195 TCAAGAAGAGAGGTTTAATGCCTGGTCTCACATTCTCTAACGAATTGATCTGCAGAGATG 2161254
Query 102039 AAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCAT 102098
||||| | ||| |||||||| ||| || | || | |||| | | | |
Sbjct 2161255 AAGGTTTACATACTGACTTTGCTTGCTTGTTATTCTCTCA----TTTG--AACAACAGAC 2161308
Query 102099 CAAGAGAAAGGATTCTTGAA---ATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTC 102155
| | ||| ||||| || | |||||||| ||| ||| ||| | | |
Sbjct 2161309 CTGACGCTGTTATTGTTGAAAAGATCATTACTGAAGCTGTCGAAATCGAAAAGGGCTACT 2161368
Query 102156 TCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACA 102215
|||| | | | ||||||| ||| | || |||||||||||| | ||| | |||||
Sbjct 2161369 TCACCGATGCTTTGCCTGTCTCTTTATTAGGTATGAACTGCAAGCTCATGTGTCAGTATG 2161428
Query 102216 TTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAA-AAGCACTATAATGTT 102274
|||||||||| ||||||| | || | ||| |||| | | || ||| || || |
Sbjct 2161429 TTGAATTTGTTGCAGATAGATTACTTCTTGCTTTGGG-CAACAAGAAGGTTTACAACTCT 2161487
Query 102275 ACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGAA 102334
|||| || || |||||||| ||||| || | | ||| || || || || |||
Sbjct 2161488 TCCAATCCATTTGACTTCATGGAAAATATCTCTTTGGCTGGTAAAACTAATTTCTTCGAA 2161547
Query 102335 AAGAGAGTCGCCGAGTATCAA 102355
|||||||| | || ||||||
Sbjct 2161548 AAGAGAGTTTCTGATTATCAA 2161568
>seq5
Length=1485630
Score = 93.3 bits (102), Expect = 8e-14
Identities = 168/243 (69%), Gaps = 2/243 (1%)
Strand=Plus/Minus
Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851
|| |||||||||||||| || | ||| ||||||||||| ||||| || |||||
Sbjct 766109 CCACCAGCAGTCTTGGAAATCAATGCACATGTTTTAAGAGTATCGTAAATGCCTTCAATT 766050
Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGAC-TGTTCCACA 94910
||| || | | | | | | ||| || || || | ||| ||| ||| ||| |||
Sbjct 766049 GAATCTTCCTTCATGGCAACCAAGAAACAAGAAGACATTTGAGGT-TGAGGTGTACCAGC 765991
Query 94911 ATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTC 94970
|||||||| || || || ||||| || ||||| | | ||||| | || ||| ||||
Sbjct 765990 ATTAAACAAAGTAGGTGATGCATGAGTGAAATACTTCAAAGACATCAAATTATAAGTTTT 765931
Query 94971 AATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTG 95030
|| ||| | ||||| || ||||| || ||||| || | ||||||||||| |||
Sbjct 765930 GATAACATTATCAATGTCATCGCCATGAATACCAACAGCAACTCTCATAATCATGTGCTG 765871
Query 95031 AGG 95033
||
Sbjct 765870 GGG 765868
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989583809814325
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |