Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016- 03-01] 15 sequences; 16,411,463 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq5 475 4e-129 seq2 248 1e-60 >seq5 Length=1485630 Score = 475 bits (526), Expect = 4e-129 Identities = 1382/2106 (66%), Gaps = 49/2106 (2%) Strand=Plus/Minus Query 62046 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62105 || || ||||| | || | ||| | || || | | ||||||||| || || || ||| Sbjct 767630 GTAAACTGAATAGCTGCTGCTGCTGCTTGAGTTCTCAAATAGTACATACCAGTCTTAAGA 767571 Query 62106 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAG-TTTGGAATAACTCGGATCTGCTAT 62164 || |||| ||||| ||||||||| || || ||| || | || ||| || Sbjct 767570 CCCTTTTTCCAACCGTAGAAATGCATAGCAGTAAGCTTTTTCATGGTT-GGTTCTCTAAT 767512 Query 62165 ATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 62224 | ||||||||| || || |||||| ||||| | || ||||| |||||||| | || Sbjct 767511 GTAGATATTCATTGACTGTGATTGATCAATGAATGGACCTCTGTCAGCAGCCATATCAAT 767452 Query 62225 GATCGTCTTT-TGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 62283 || | |||| || | | |||||| ||||||| || | | ||| | || | ||||| Sbjct 767451 AAT-GACTTTCTGAGATAATTCCCATGTAGTTTTGTACAATTCCTTCAATTCCTTTGGAA 767393 Query 62284 GGTTTGTA---TTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCATCAT 62340 ||||||| || ||||| || ||| ||| | |||||| | ||||| || ||||| Sbjct 767392 TGTTTGTAATATTTTGAATAGAGCCATTATCAGCGATAATCTTGTTCTTCATAGAATCAT 767333 Query 62341 TCCATAATTTTCTCTCGGTTAAAAC--TC--TAAGGAGATGCGGGTTAACTACTTGGAAT 62396 ||| ||| | | | || | || |||| | || ||||| | ||| ||| Sbjct 767332 CCCA-AATGCCCAAT---TCAACAAGGTCCTTAAGTAACCATGGATTAACAATTTGAAAT 767277 Query 62397 TCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTA 62456 || |||| ||| ||||| | || ||| |||||| ||||| ||||| | | ||||| Sbjct 767276 TCACCAGCCAAAACTCTTCTAGAGTAGATATTAGAAGTATATGGTTCGAAACATTCATTG 767217 Query 62457 TTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTA 62516 || | |||||||| ||| |||||||| |||||||| || || || | | |||||| Sbjct 767216 AAACCAAGAATTTGAGAAGTAGATGCAGTTGGCATAGGAGCAACTAAAAGAGAGTTTCTA 767157 Query 62517 AGACCGTATGTTCTG-ATTTTATCTTTTAGATGT-TCCCAATTCCAAAGATCCGACGGTA 62574 | || ||| | | | || ||| || | | ||||||| ||| | ||| | ||| Sbjct 767156 ATTCC--ATGCTTAGCAACTTGTCTCTTCAAAGAATCCCAATCCCATAAATCAGTTGGTT 767099 Query 62575 CAACANNNNNNNNNNNATATTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTAT 62634 || | | |||||| ||| ||| || |||| | ||| || | Sbjct 767098 TAATACCCCAAAGATCAAATTGTAATTGACCCTTAGCAGCTGGCGATGTTTTATAAGTTT 767039 Query 62635 CATATGGTCCTTCCTTCTCAGCTAGTTTACAACTC--GCCTCTAATGCACCGTAATAAAT 62692 ||| |||||||| | | || | | ||||| || || | |||| | | ||||| Sbjct 767038 GATAAGGTCCTTCAATTTTGGCCAAGT--CAACTGAGGCTTCAACTGCAGCATGGTAAAT 766981 Query 62693 GGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAA 62752 ||||||||||||| |||| | | || ||||| || ||||||||| | |||| Sbjct 766980 AGTTTCAAAGATCTGGATATTCAATTGTTTAGCTTCAGGTGAATCAAATGGCAATCTTAA 766921 Query 62753 GAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATT 62812 ||||| || || | | ||||| ||||||||| | ||||| |||| |||||| || Sbjct 766920 TGCCATAAAGGCATCAGAAAGACCTTGGACACCAATAGCAATAGGCCTATTTCTCTTGTT 766861 Query 62813 AGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCT 62872 ||| | || || |||| |||||||||||| |||| || ||||| || | ||| Sbjct 766860 GGAGTACTTGGCCTCAGGAACAGGATAATAATTTCTATCAATGATTTTGTTCAAATTATG 766801 Query 62873 GACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATC-GCCCATCT------- 62924 || | || || || || | | ||| |||||| | | ||| ||| Sbjct 766800 AACCAAGACCTTAGTGACTTCATGTAATTTCTCAAAATCGTACCAACCCTTCTTACTATC 766741 Query 62925 ----ATTACAAACATGTTCAATGCAACAGATGCCAGATTACACACGGCTACCTCATTAGC 62980 | ||||| | || |||| ||| |||| |||||| || || || |||| || Sbjct 766740 ACCAGTAACAAAAGTAGGTAAAGCAAGAGAAGCCAAATTACATACAGCAACTTCATCAGG 766681 Query 62981 ATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTG 63040 | | |||| | || ||| ||| | |||||| | ||||| || | ||| | Sbjct 766680 AGAAGAGTATTCAACAATTTCACAGCATAAATTACTTGATTTGATGACACCAAGATTCTT 766621 Query 63041 TTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAAT 63100 |||||| ||| | ||||| || ||||||||||| |||||||| |||||||||| | Sbjct 766620 TTGATTGGACTTCTCATTACAAGCGTCCTTATAAAGCATGAATGGGACACCAGTTTCAGT 766561 Query 63101 CTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCT 63160 |||| ||| | ||| | | ||| | | |||| || | | | | ||| | Sbjct 766560 TTGAGCTTCCAAAATAGAGTACCAAAGTTTTTGAGCTTTCACTGTTCTTACAGCTCTTCC 766501 Query 63161 TTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACATT--GTCCAAT 63218 ||| | ||| ||| |||||| ||| || || | | || |||| | | || Sbjct 766500 TTCACGTTCATATCTTTCATACAAAGCTTCAAATTC-TTTACCGTAACAATCAGATAAAC 766442 Query 63219 CTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 63278 || ||| ||||| || | | || ||||| || ||| || ||| |||| |||||| Sbjct 766441 CT-GGAGCTTCATTAGGTGAAAAGAAAGACCAATCACCGCCAGCCTCAACTCTCTTCATA 766383 Query 63279 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCT 63338 || | |||| |||||| | || | ||||| |||||| | ||| ||| || ||||| Sbjct 766382 AATAAATCACTAATCCATAAGGCAACAAATAAATCTCTGGCTCTGATTTCTTCTTTTCCG 766323 Query 63339 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 63398 ||||||| | | || | ||| | | ||||||| |||||| ||||| ||||||| Sbjct 766322 TGATTCTTTCTCACGTCAATGAAATCAAAGATATCAGGATGCCAAGGTTCTAAGTATAAA 766263 Query 63399 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 63458 || | | | ||||| ||||| || || || || || | |||||||| ||||| || || Sbjct 766262 GCGAAAGCACCAGGGCGTTTATTACCACCTTGGTCCACATATCTAGCAGTGTTGTTGAAA 766203 Query 63459 ACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCA 63518 || | || ||| || |||||||| || ||| | || || ||||| | ||||| ||| Sbjct 766202 ACACGCATCATGGGGATAATACCATTAGATGTTCCGTTAGTACCAGCAATATAAGAACCA 766143 Query 63519 CTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 63578 | | | ||||||| || || ||| || || || || | || || || ||||| Sbjct 766142 GTTGATCTAATATTATGGATATGTAAACCAATACCACCAGCAGTCTTGGAAATCAATGCA 766083 Query 63579 CATCGTTTTAA-CGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAA 63637 ||| ||||||| || || || |||||||| || ||| || ||||| || | || Sbjct 766082 CAT-GTTTTAAGAGTATCGTAAATGCCTTCAATTGAATCTTCCTTCATGGCAACCAAGAA 766024 Query 63638 ACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGT 63697 ||| ||||||||| | ||| || || |||||||| || ||||| || || || || Sbjct 766023 ACAAGAAGACATTTGAGGTTGAGGTGTACCAGCATTAAACAAAGTAGGTGATGCATGAGT 765964 Query 63698 AAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTG--A 63755 || | || ||| | | ||| || || | ||| | | | | || ||| | | Sbjct 765963 GAAATACTTCAAAGACATCAAATTATAAGTTTTGATAAC--ATTATCAATGTCATCGCCA 765906 Query 63756 TGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTT 63815 ||||| || || || || | ||| | ||||||||| ||||||||| | | |||| | | Sbjct 765905 TGAATACCAACAGCAACTCTCATAATCATGTGCTGGGGTCTTTCAGCGACTTTGCCATCT 765846 Query 63816 ATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGT 63873 | | | || || || ||| || || ||||| |||||||| || || || ||||| | Sbjct 765845 ACTCTTAATAAATAAGATCGCTCTAATGTTTTGAAACCAAAGTAATTATAGTTGAAA--T 765788 Query 63874 CTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTATATCCATGG 63933 | ||||| |||| |||| ||||||| | | || | || | | || || || | Sbjct 765787 CGCGTTCATAAACAATAGCCGAATTCAATTCTTCTTCATGTCTTGCAATAATGTCATAAG 765728 Query 63934 TAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAAT 63993 | |||| || || ||||||||||| | || |||| |||| || | ||||| Sbjct 765727 TCTCCTTTGAGATCATAGGAGAATGTTTTCTCGTTCTAGGGTTAATGTATTCATATAAAA 765668 Query 63994 CCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTC 64053 ||| ||| |||| | ||| |||| | |||| || || |||||||| | || |||| Sbjct 765667 CCTTCATGACTTGAGAGAATTGTTTGATGGTTTGTTTATGGAGATTTGAAACAGCAATTC 765608 Query 64054 TGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTG 64113 | || || | ||| |||||||| ||||| ||||| | ||| || ||||| || | Sbjct 765607 TAGCAGCCAAAATAGCATAATCAGGATGAATAGTAGTCATATAGGCAGCAATTTCAGCCG 765548 Query 64114 CCAGAG 64119 || ||| Sbjct 765547 CCTGAG 765542 >seq2 Length=2234776 Score = 248 bits (274), Expect = 1e-60 Identities = 605/906 (67%), Gaps = 18/906 (2%) Strand=Plus/Minus Query 33275 AGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCC 33334 || |||||| || ||||| || ||| || | |||||||| ||||||||||| || Sbjct 2161586 AGCCATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCGAAGAAATTAGTTTTACC 2161527 Query 33335 TTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAA 33394 |||| || |||||||||||||| ||||| ||||||| | ||||||| || || Sbjct 2161526 AGCCAAAGAGATATTTTCCATGAAGTCAAATGGATTGGAAGAGTTGTAAACCTTCTTGTT 2161467 Query 33395 TCCCAATTCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACA 33454 ||||| || || ||||||||||| || ||||| | ||| ||| | | || Sbjct 2161466 GCCCAAAGCAAGAAGTAATCTATCTGCAACAAATTCAACATACTGACACATGAGCTTGCA 2161407 Query 33455 ATTCATTCCTATGAGTTTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATGGATA 33513 ||||| |||| | || || | ||| | || ||| | ||| ||| || | Sbjct 2161406 GTTCATACCTAATAAAGAGACAGGCAAAGCATCGGTGAAGTAGCCCTT-TTCGATTTCGA 2161348 Query 33514 CCGCATTTGTTATAATAAATCTAACGGTTTCTTCACTCGGTG-GATGTAATAAATGTTTA 33572 | || | || || || | ||| | | | ||| | ||| ||||| Sbjct 2161347 CAGCTTCAGTAATGATCTTTTCAACAATAACAGCGTCAGGTCTGTTGTTC-AAATGAGAG 2161289 Query 33573 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAA 33632 || | ||| || || || || || | ||| || ||||| | || ||||||||||| Sbjct 2161288 AATAACAAGCAAGCAAAGTCAGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAG 2161229 Query 33633 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCG 33692 || ||||| || ||||||| || | ||| || ||||| || || ||||| || || || Sbjct 2161228 AATGTGAGACCAGGCATTAAACCTCTCTTCTTGAGCCAGAAGATAGAAGCAAACGAGCCC 2161169 Query 33693 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAAC----CGGC 33748 || ||||| || ||||| || ||||||||||||| | ||| || ||| ||| | | Sbjct 2161168 GAGAAGAAAATACCTTCAACAGCAGCAAAGGCAACTAATCTTTCACCA-AACAATGCTTC 2161110 Query 33749 GCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTC 33808 ||||| ||||| | |||||| || ||||| | ||| | || || || |||| Sbjct 2161109 ATCGTCATTGATCCATCGTAAAGCCCATTCAGCCTTTTGTTTGATGCATGGAATGTTTTC 2161050 Query 33809 TATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCA--AA 33866 || ||||| || | ||| | | ||| || | || || | ||||||||| |||| || Sbjct 2161049 AATAGCATTGAATAAATAATCTGCTTCCTTTGTGTCCTTGATATAAGTATCAATCAGTAA 2160990 Query 33867 AGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTA 33926 || || |||| || || |||||||| || || || || || ||||| || | Sbjct 2160989 GGA--GTAAGTTTCAGAGTGGATGTTTTCCATCATGATTTGGAAACCATAGAAGCACTTG 2160932 Query 33927 GCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCA 33986 || || | || || ||||| | | || |||| ||||||||||||| || || ||| Sbjct 2160931 GCTTCAGGAAGTTGAACTTCAGCTGAGAAGTTTTCTACTAAATTTTCATTAACAATACCA 2160872 Query 33987 TCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT--- 34043 ||| || ||||| || || || || | |||||| || |||| | || || Sbjct 2160871 TCAGATGCAGCAAAGAAAGCTAAGACTCTTGAAATAAAAAATCTTTCAT-TGTCATTCAA 2160813 Query 34044 -AGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGA 34102 | || | |||||||| | ||| || || || | ||||| | ||||| || || Sbjct 2160812 ACGGTTTTCCCAATCATGAACATCCTTTCCTAAGTCAATCTCTTCTGCAGTCCAGAAGGA 2160753 Query 34103 TGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 34162 || || || || |||||||| | |||||| |||||||||| |||||||||| |||||| Sbjct 2160752 AGCTTCAGCTTTCTTATACATTTGCCAGATTTCATGATATTTAATTGGGAAAAGAACAAA 2160693 Query 34163 TCTATT 34168 ||| || Sbjct 2160692 TCTTTT 2160687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629817481909200