Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016- 03-01] 15 sequences; 16,411,463 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq5 506 3e-138 seq2 253 3e-62 >seq5 Length=1485630 Score = 506 bits (560), Expect = 3e-138 Identities = 1389/2106 (66%), Gaps = 49/2106 (2%) Strand=Plus/Minus Query 64839 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 64898 || || ||||| | || | ||| | || || | | ||||||||| || || || ||| Sbjct 767630 GTAAACTGAATAGCTGCTGCTGCTGCTTGAGTTCTCAAATAGTACATACCAGTCTTAAGA 767571 Query 64899 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAG-TTTGGAATAACTCGGATCTGCTAT 64957 || |||| ||||| ||||||||| || || ||| || | || ||| || Sbjct 767570 CCCTTTTTCCAACCGTAGAAATGCATAGCAGTAAGCTTTTTCATGGTT-GGTTCTCTAAT 767512 Query 64958 ATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 65017 | ||||||||| || || |||||| ||||| | || ||||| |||||||| | || Sbjct 767511 GTAGATATTCATTGACTGTGATTGATCAATGAATGGACCTCTGTCAGCAGCCATATCAAT 767452 Query 65018 GATCGTCTTT-TGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 65076 || | |||| || | | |||||| ||||||| || | | ||| | || | ||||| Sbjct 767451 AAT-GACTTTCTGAGATAATTCCCATGTAGTTTTGTACAATTCCTTCAATTCCTTTGGAA 767393 Query 65077 GGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCAT 65133 ||||||| || ||||| || ||| ||| || |||||| | ||||| || ||||| Sbjct 767392 TGTTTGTAATATTTTGAATAGAGCCATTATCAGCGATAATCTTGTTCTTCATAGAATCAT 767333 Query 65134 TCCATAATTTTCTCTCGGTTAAAAC--TC--TAAGGAGATGCGGATTAACTACTTGAAAT 65189 ||| ||| | | | || | || |||| | |||||||| | ||||||| Sbjct 767332 CCCA-AATGCCCAAT---TCAACAAGGTCCTTAAGTAACCATGGATTAACAATTTGAAAT 767277 Query 65190 TCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTA 65249 || |||| ||| ||||| | || ||| |||||| ||||| ||||| | | | ||||| Sbjct 767276 TCACCAGCCAAAACTCTTCTAGAGTAGATATTAGAAGTATATGGTTCGAAACATTCATTG 767217 Query 65250 TTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTA 65309 || | |||||||| ||| |||||||| |||||||| || || || | | |||||| Sbjct 767216 AAACCAAGAATTTGAGAAGTAGATGCAGTTGGCATAGGAGCAACTAAAAGAGAGTTTCTA 767157 Query 65310 AGACCGTATGTTCTG-ATTTTATCTTTT-AGAGGTTCCCAATTCCAAAGATCCGACGGTA 65367 | || ||| | | | || ||| || | || ||||||| ||| | ||| | ||| Sbjct 767156 ATTCC--ATGCTTAGCAACTTGTCTCTTCAAAGAATCCCAATCCCATAAATCAGTTGGTT 767099 Query 65368 CAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTAT 65427 || ||||| ||| ||| || |||| | ||| || | Sbjct 767098 TAATACCCCAAAGATCAAATTGTAATTGACCCTTAGCAGCTGGCGATGTTTTATAAGTTT 767039 Query 65428 CGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTC--GCCTCTAATGCACCGTAATAAAT 65485 || |||||||| | | || | ||| ||| || || | |||| | | ||||| Sbjct 767038 GATAAGGTCCTTCAATTTTGGCCAAGTCA--ACTGAGGCTTCAACTGCAGCATGGTAAAT 766981 Query 65486 GGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAA 65545 ||||| ||||||| |||| | | || ||||| | ||||||||| | |||| Sbjct 766980 AGTTTCAAAGATCTGGATATTCAATTGTTTAGCTTCAGGTGAATCAAATGGCAATCTTAA 766921 Query 65546 GAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATT 65605 ||||| || || | | ||||| ||||||||| | ||||| |||| |||||| || Sbjct 766920 TGCCATAAAGGCATCAGAAAGACCTTGGACACCAATAGCAATAGGCCTATTTCTCTTGTT 766861 Query 65606 AGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCT 65665 ||| | || || |||| |||||||||||| |||| || ||||| || | ||| Sbjct 766860 GGAGTACTTGGCCTCAGGAACAGGATAATAATTTCTATCAATGATTTTGTTCAAATTATG 766801 Query 65666 GACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCA----AATCGCTCAT-CTATT 65720 || | || || || || | | ||| |||||| || | || | |||| Sbjct 766800 AACCAAGACCTTAGTGACTTCATGTAATTTCTCAAAATCGTACCAACCCTTCTTACTATC 766741 Query 65721 ACAA-----ACATGTTC--AATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGC 65773 || | | | || || |||| ||| |||| |||||| || || || |||| || Sbjct 766740 ACCAGTAACAAAAGTAGGTAAAGCAAGAGAAGCCAAATTACATACAGCAACTTCATCAGG 766681 Query 65774 ATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTG 65833 | | |||| | || ||| ||| | |||||| | |||||| || | ||| | Sbjct 766680 AGAAGAGTATTCAACAATTTCACAGCATAAATTACTTGATTTGATGACACCAAGATTCTT 766621 Query 65834 TTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAAT 65893 |||||| ||| | ||||| || ||||||||||| |||||||| |||||||||| | Sbjct 766620 TTGATTGGACTTCTCATTACAAGCGTCCTTATAAAGCATGAATGGGACACCAGTTTCAGT 766561 Query 65894 CTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTT 65953 |||| ||| | ||| | | ||| | | |||| || | | | || | ||||| Sbjct 766560 TTGAGCTTCCAAAATAGAGTACCAAAGTTTTTGAGCTTTCACTGTTC--TTACAGCTCTT 766503 Query 65954 --TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAAT 66011 ||| | ||| ||| | |||||| ||| || || | || || || || Sbjct 766502 CCTTCACGTTCATATCTTTCATACAAAGCTTCAAATTCTTTACCGTAACAATCAGATAAA 766443 Query 66012 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 66071 || ||| ||||| || | | || ||||| || ||| || ||| |||| |||||| Sbjct 766442 CCTGGAGCTTCATTAGGTGAAAAGAAAGACCAATCACCGCCAGCCTCAACTCTCTTCATA 766383 Query 66072 AAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCT 66131 || | |||| |||||| | || | |||||||||||||| ||| ||| || ||||| Sbjct 766382 AATAAATCACTAATCCATAAGGCAACAAATAAATCTCTGGCTCTGATTTCTTCTTTTCCG 766323 Query 66132 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATG 66191 ||||||| | | || | ||| | | |||||| |||||| ||||| ||||||| Sbjct 766322 TGATTCTTTCTCACGTCAATGAAATCAAAGATATCAGGATGCCAAGGTTCTAAGTATAAA 766263 Query 66192 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 66251 || | | | ||||| ||||| || || || || || | |||||||| ||||| || || Sbjct 766262 GCGAAAGCACCAGGGCGTTTATTACCACCTTGGTCCACATATCTAGCAGTGTTGTTGAAA 766203 Query 66252 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCA 66311 || | || ||| || ||||||||||| ||||| || || || || | ||||| ||| Sbjct 766202 ACACGCATCATGGGGATAATACCATTAGATGTTCCGTTAGTACCAGCAATATAAGAACCA 766143 Query 66312 CTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 66371 ||| | ||||||| || || ||| || || || || | || || || ||||| Sbjct 766142 GTTGATCTAATATTATGGATATGTAAACCAATACCACCAGCAGTCTTGGAAATCAATGCA 766083 Query 66372 CATCGTTTTAA-CGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAA 66430 ||| ||||||| ||||| || ||||| || || ||| ||| ||||| || | || Sbjct 766082 CAT-GTTTTAAGAGTATCGTAAATGCCTTCAATTGAATCTTCCTTCATGGCAACCAAGAA 766024 Query 66431 ACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGT 66490 ||| ||||||||| | || || || |||||||| || ||||| || || || || Sbjct 766023 ACAAGAAGACATTTGAGGTTGAGGTGTACCAGCATTAAACAAAGTAGGTGATGCATGAGT 765964 Query 66491 AAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTG--A 66548 || | || ||| | | ||| || || | ||| | | | | || ||| | | Sbjct 765963 GAAATACTTCAAAGACATCAAATTATAAGTTTTGATAAC--ATTATCAATGTCATCGCCA 765906 Query 66549 TGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTT 66608 ||||| || || || || | ||| | ||||||||| ||||||||| ||| ||| | | Sbjct 765905 TGAATACCAACAGCAACTCTCATAATCATGTGCTGGGGTCTTTCAGCGACTTTGCCATCT 765846 Query 66609 ATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGT 66666 | | | || || || ||| || || ||||| |||||||| || || || ||||| | Sbjct 765845 ACTCTTAATAAATAAGATCGCTCTAATGTTTTGAAACCAAAGTAATTATAGTTGAAA--T 765788 Query 66667 CTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGG 66726 | ||||| |||| |||| |||| || | || || | || | | || | || | Sbjct 765787 CGCGTTCATAAACAATAGCCGAATTCAATTCTTCTTCATGTCTTGCAATAATGTCATAAG 765728 Query 66727 TAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAAT 66786 | |||| || || ||||||||||| | || |||| || | || | ||||| Sbjct 765727 TCTCCTTTGAGATCATAGGAGAATGTTTTCTCGTTCTAGGGTTAATGTATTCATATAAAA 765668 Query 66787 CCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTC 66846 ||| ||| |||| | ||| |||| | |||| ||| || |||||||| || || |||| Sbjct 765667 CCTTCATGACTTGAGAGAATTGTTTGATGGTTTGTTTATGGAGATTTGAAACAGCAATTC 765608 Query 66847 TAGCGGCTATAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTG 66906 |||| || | ||| |||||||| ||||| ||||| | ||| || ||||| || | Sbjct 765607 TAGCAGCCAAAATAGCATAATCAGGATGAATAGTAGTCATATAGGCAGCAATTTCAGCCG 765548 Query 66907 CCAGAG 66912 || ||| Sbjct 765547 CCTGAG 765542 >seq2 Length=2234776 Score = 253 bits (280), Expect = 3e-62 Identities = 613/919 (67%), Gaps = 28/919 (3%) Strand=Plus/Minus Query 35851 AGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACC 35910 || |||||| || ||||| || ||| || | |||||||| |||||||||||||| Sbjct 2161586 AGCCATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCGAAGAAATTAGTTTTACC 2161527 Query 35911 TTCTAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAA 35970 | || || |||||||||||||| || ||||||||| | || |||| || || Sbjct 2161526 AGCCAAAGAGATATTTTCCATGAAGTCAAATGGATTGGAAGAGTTGTAAACCTTCTTGTT 2161467 Query 35971 TCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACA 36030 ||||| || || ||||||||||| |||||||| | ||| ||| | | || Sbjct 2161466 GCCCAAAGCAAGAAGTAATCTATCTGCAACAAATTCAACATACTGACACATGAGCTTGCA 2161407 Query 36031 ATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGA 36089 ||||| |||| | || || | ||| | || ||| | ||| ||| || || Sbjct 2161406 GTTCATACCTAATAAAGAGACAGGCAAAGCATCGGTGAAGTAGCCCTT-TTCGATTTCGA 2161348 Query 36090 CCGCGTCTGTTATAATAGAT------ATTACTGTTTCTTCAC-TCGGTGGATACAATAAA 36142 | || || || || || | || || | | ||| || || | | ||| | Sbjct 2161347 CAGCTTCAGTAATGATCTTTTCAACAATAACAG---CGTCAGGTCTGTTGTTCAAATGAG 2161291 Query 36143 TGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCG 36202 | ||| ||| || || || || |||| ||| || ||||| | || |||||| Sbjct 2161290 AGAATAA----CAAGCAAGCAAAGTCAGTATGTAAACCTTCATCTCTGCAGATCAATTCG 2161235 Query 36203 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 36262 || || || ||||| || ||||||| || | ||| || ||||| || || || ||||| Sbjct 2161234 TTAGAGAATGTGAGACCAGGCATTAAACCTCTCTTCTTGAGCCAGAAGATAGAAGCAAAC 2161175 Query 36263 GATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAAC-- 36320 || || || |||||||| ||||| || || |||||||||| | ||| || ||| ||| Sbjct 2161174 GAGCCCGAGAAGAAAATACCTTCAACAGCAGCAAAGGCAACTAATCTTTCACCA-AACAA 2161116 Query 36321 --CGGCACTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCAT 36378 | || ||||| ||||| | |||||| || ||||| | ||| | || || || Sbjct 2161115 TGCTTCATCGTCATTGATCCATCGTAAAGCCCATTCAGCCTTTTGTTTGATGCATGGAAT 2161056 Query 36379 TGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAAT 36438 | || |||||||| || | ||| | | ||| || | || || | ||| |||||||| Sbjct 2161055 GTTTTCAATAGCATTGAATAAATAATCTGCTTCCTTTGTGTCCTTGATATAAGTATCAAT 2160996 Query 36439 CA--AAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAA 36496 || || || || |||| || || |||||||| || ||||| || || ||||| Sbjct 2160995 CAGTAAGGAGTAAG--TTTCAGAGTGGATGTTTTCCATCATGATTTGGAAACCATAGAAG 2160938 Query 36497 CATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACT 36556 || | || || | || || ||||| | | || |||| ||||||||||||| || Sbjct 2160937 CACTTGGCTTCAGGAAGTTGAACTTCAGCTGAGAAGTTTTCTACTAAATTTTCATTAACA 2160878 Query 36557 ATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGT 36616 || || ||| || ||||| || || || || | |||||| || |||| || Sbjct 2160877 ATACCATCAGATGCAGCAAAGAAAGCTAAGACTCTTGAAATAAAAAATCTTTCATTGTCA 2160818 Query 36617 GTTA---GTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAA 36673 | | | || | |||||||| | ||| || || || | ||||| | ||||| Sbjct 2160817 TTCAAACGGTTTTCCCAATCATGAACATCCTTTCCTAAGTCAATCTCTTCTGCAGTCCAG 2160758 Query 36674 AATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATA 36733 || || || || || || |||||||| | |||||| |||||||||| |||||| |||| | Sbjct 2160757 AAGGAAGCTTCAGCTTTCTTATACATTTGCCAGATTTCATGATATTTAATTGGGAAAAGA 2160698 Query 36734 ACAAATCTATTTTGATTTT 36752 |||||||| || | |||| Sbjct 2160697 ACAAATCTTTTATCGTTTT 2160679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658172676592600